RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891		A0A087WW49	117 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	VGLL3	A8MV65	326 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	LMO7DN	F2Z398	122 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	SGK494	L7N484	410 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	ZG16	O60844	167 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	CS	O75390	466 aa	Known RBP	4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	B3GAT3	O94766	335 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	RHOBTB1	O94844	696 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	PRAMEF12	O95522	483 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	LYN	P07948	512 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	MBL2	P11226	248 aa	Predicted RBP	4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	IL4R	P24394	825 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	PSMA5	P28066	241 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	AXL	P30530	894 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	FHIT	P49789	147 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	ARFIP1	P53367	373 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	ABCE1	P61221	599 aa	Known RBP	4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	GUCY2D	Q02846	1103 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	SF3A2	Q15428	464 aa	Known RBP	4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	ZSWIM7	Q19AV6	140 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	XKR4	Q5GH76	650 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	ADAMTSL4-AS1	Q5T5F5	129 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	SLC39A4	Q6P5W5	647 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	GVQW1	Q8N7I0	195 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	P3H4	Q92791	437 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	TCEAL3	Q969E4	200 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	CLDN23	Q96B33	292 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	CCDC51	Q96ER9	411 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	FUCA2	Q9BTY2	467 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	RAB11FIP5	Q9BXF6	653 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	TRIM6	Q9C030	488 aa	Predicted RBP	4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	POLR1E	Q9GZS1	481 aa	Known RBP	4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	WDR76	Q9H967	626 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	YAE1D1	Q9NRH1	226 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	COX16	Q9P0S2	106 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	CHD6	Q8TD26	2715 aa		4.84	□□□□□ -1.63
NRXN1-223	ENST00000625891	KIF26B	Q2KJY2	2108 aa		4.84	□□□□□ -1.64
NRXN1-223	ENST00000625891	ACACB	O00763	2458 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	SF3B1	O75533	1304 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	TRIM49B	A6NDI0	452 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	NR5A2	O00482	541 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	SLC16A4	O15374	487 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	MAGEB3	O15480	346 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	TLX2	O43763	284 aa	Predicted RBP	4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	FAM189A1	O60320	539 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	NEMF	O60524	1076 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	MTRF1	O75570	445 aa	Known RBP	4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	ZFAND5	O76080	213 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	NDUFA7	O95182	113 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	GSTA1	P08263	222 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	RPS2	P15880	293 aa	Known RBP	4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	ZNF26	P17031	533 aa	Predicted RBP	4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	CCNE1	P24864	410 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	PTPN6	P29350	595 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	NMT1	P30419	496 aa	Known RBP	4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	GDI1	P31150	447 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	FCGR2B	P31994	310 aa	Predicted RBP	4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	SOX3	P41225	446 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	PEX3	P56589	373 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	HERVK_113	P63132	956 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	ERVK-8	P63133	956 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	TWF1	Q12792	350 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	MXD4	Q14582	209 aa	Predicted RBP	4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	POM121L1P	Q3SYA9	428 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	SLC36A3	Q495N2	470 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	ATF7IP2	Q5U623	682 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	SDHAF4	Q5VUM1	108 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	ADAM5	Q6NVV9	412 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	OTUD6A	Q7L8S5	288 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	DND1	Q8IYX4	353 aa	Known RBP	4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	PARP8	Q8N3A8	854 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	RAB42	Q8N4Z0	105 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	TMEM178A	Q8NBL3	297 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	DDHD1	Q8NEL9	900 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	OR5M9	Q8NGP3	310 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	OR6S1	Q8NH40	331 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	GPR148	Q8TDV2	347 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	SLC5A11	Q8WWX8	675 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	PCED1B	Q96HM7	432 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	RAB40C	Q96S21	281 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	ERP44	Q9BS26	406 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	ERVK-6	Q9BXR3	956 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	NFKBIZ	Q9BYH8	718 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	FGFBP2	Q9BYJ0	223 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	HOXD1	Q9GZZ0	328 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	ZDHHC4	Q9NPG8	344 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	CCL26	Q9Y258	94 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	NUP205	Q92621	2012 aa		4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	TNRC6B	Q9UPQ9	1833 aa	Known RBP	4.83	□□□□□ -1.64
NRXN1-223	ENST00000625891	SPAG17	Q6Q759	2223 aa		4.82	□□□□□ -1.64
NRXN1-223	ENST00000625891	SMG1	Q96Q15	3661 aa	Known RBP	4.82	□□□□□ -1.64
NRXN1-223	ENST00000625891	HELZ	P42694	1942 aa	Known RBP	4.82	□□□□□ -1.64
NRXN1-223	ENST00000625891	MEIOC	A2RUB1	952 aa		4.82	□□□□□ -1.64
NRXN1-223	ENST00000625891	SRRM4	A7MD48	611 aa	Known RBP	4.82	□□□□□ -1.64
NRXN1-223	ENST00000625891	ANKRD63	C9JTQ0	380 aa		4.82	□□□□□ -1.64
NRXN1-223	ENST00000625891	CFLAR	O15519	480 aa		4.82	□□□□□ -1.64
NRXN1-223	ENST00000625891	TBX19	O60806	448 aa		4.82	□□□□□ -1.64
NRXN1-223	ENST00000625891	PALM	O75781	387 aa		4.82	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms