RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 H0YAE9 185 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 DLL1O00548 723 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 MITFO75030 526 aaPredicted RBP19.09■□□□□ 0.65
PNKP-203ENST00000593946 THY1P04216 161 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 CELA2AP08217 269 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 UBTFL6P0CB48 400 aaPredicted RBP19.09■□□□□ 0.65
PNKP-203ENST00000593946 CBLP22681 906 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 CAPGP40121 348 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 FOXD4Q12950 439 aaPredicted RBP19.09■□□□□ 0.65
PNKP-203ENST00000593946 TRAM2Q15035 370 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 CD226Q15762 336 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 PODNL1Q6PEZ8 512 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 IGF2-ASQ6U949 168 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 CYGBQ8WWM9 190 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 SLC41A3Q96GZ6 507 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 ZNF559Q9BR84 538 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 KRT84Q9NSB2 600 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 PCDHGA6Q9Y5G7 932 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 DOCK10Q96BY6 2186 aa19.09■□□□□ 0.65
PNKP-203ENST00000593946 A0A1W2PQD3 144 aa19.08■□□□□ 0.65
PNKP-203ENST00000593946 NAGAP17050 411 aa19.08■□□□□ 0.65
PNKP-203ENST00000593946 RBMS1P29558 406 aaKnown RBP19.08■□□□□ 0.65
PNKP-203ENST00000593946 KCNAB2Q13303 367 aa19.08■□□□□ 0.65
PNKP-203ENST00000593946 OR1Q1Q15612 314 aa19.08■□□□□ 0.65
PNKP-203ENST00000593946 NDUFAF6Q330K2 333 aa19.08■□□□□ 0.65
PNKP-203ENST00000593946 ZNF550Q7Z398 422 aa19.08■□□□□ 0.65
PNKP-203ENST00000593946 GDF7Q7Z4P5 450 aa19.08■□□□□ 0.65
PNKP-203ENST00000593946 GALNT5Q7Z7M9 940 aa19.08■□□□□ 0.65
PNKP-203ENST00000593946 POGLUT1Q8NBL1 392 aa19.08■□□□□ 0.65
PNKP-203ENST00000593946 NKD1Q969G9 470 aa19.08■□□□□ 0.65
PNKP-203ENST00000593946 ZNF160Q9HCG1 818 aa19.08■□□□□ 0.65
PNKP-203ENST00000593946 ASCL3Q9NQ33 180 aa19.08■□□□□ 0.65
PNKP-203ENST00000593946 TRAPPC13A5PLN9 417 aa19.08■□□□□ 0.64
PNKP-203ENST00000593946 ALG1L2C9J202 215 aa19.08■□□□□ 0.64
PNKP-203ENST00000593946 GNAO1P09471 354 aa19.08■□□□□ 0.64
PNKP-203ENST00000593946 UBL4AP11441 157 aa19.08■□□□□ 0.64
PNKP-203ENST00000593946 IL10RAQ13651 578 aa19.08■□□□□ 0.64
PNKP-203ENST00000593946 EFR3AQ14156 821 aa19.08■□□□□ 0.64
PNKP-203ENST00000593946 ZNF440Q8IYI8 595 aa19.08■□□□□ 0.64
PNKP-203ENST00000593946 AQP11Q8NBQ7 271 aa19.08■□□□□ 0.64
PNKP-203ENST00000593946 TOR1AIP2Q8NFQ8 470 aa19.08■□□□□ 0.64
PNKP-203ENST00000593946 PHOSPHO1Q8TCT1 267 aa19.08■□□□□ 0.64
PNKP-203ENST00000593946 CNBD2Q96M20 576 aa19.08■□□□□ 0.64
PNKP-203ENST00000593946 NIPSNAP1Q9BPW8 284 aa19.08■□□□□ 0.64
PNKP-203ENST00000593946 ZBTB20Q9HC78 741 aaPredicted RBP19.08■□□□□ 0.64
PNKP-203ENST00000593946 EXOSC3Q9NQT5 275 aaKnown RBP19.08■□□□□ 0.64
PNKP-203ENST00000593946 FAM118AQ9NWS6 357 aa19.08■□□□□ 0.64
PNKP-203ENST00000593946 PCNX3Q9H6A9 2034 aa19.08■□□□□ 0.64
PNKP-203ENST00000593946 FREM2Q5SZK8 3169 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 FADS1O60427 444 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 OR2J2O76002 312 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 HPP00738 406 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 CDH2P19022 906 aaPredicted RBP19.07■□□□□ 0.64
PNKP-203ENST00000593946 EVI2BP34910 448 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 SKP2Q13309 424 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 PDK3Q15120 406 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 ZNF613Q6PF04 617 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 LYPD8Q6UX82 237 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 USP51Q70EK9 711 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 DTX1Q86Y01 620 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 LINC00471Q8N535 108 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 LSMEM1Q8N8F7 131 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 GATSQ8NAP1 163 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 SLC22A8Q8TCC7 542 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 SLC38A4Q969I6 547 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 ARSGQ96EG1 525 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 RTN4RQ9BZR6 473 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 FBXL4Q9UKA2 621 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 CDV3Q9UKY7 258 aaKnown RBP19.07■□□□□ 0.64
PNKP-203ENST00000593946 SLC7A7Q9UM01 511 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 POFUT2Q9Y2G5 429 aa19.07■□□□□ 0.64
PNKP-203ENST00000593946 A0A087WUU8 490 aa19.06■□□□□ 0.64
PNKP-203ENST00000593946 H3BNH8 94 aa19.06■□□□□ 0.64
PNKP-203ENST00000593946 OR10H3O60404 316 aa19.06■□□□□ 0.64
PNKP-203ENST00000593946 LYPD3O95274 346 aa19.06■□□□□ 0.64
PNKP-203ENST00000593946 GASTP01350 101 aa19.06■□□□□ 0.64
PNKP-203ENST00000593946 RPSAP08865 295 aaKnown RBP19.06■□□□□ 0.64
PNKP-203ENST00000593946 ITGAMP11215 1152 aa19.06■□□□□ 0.64
PNKP-203ENST00000593946 TMED10P49755 219 aaKnown RBP19.06■□□□□ 0.64
PNKP-203ENST00000593946 MRGPREQ86SM8 312 aa19.06■□□□□ 0.64
PNKP-203ENST00000593946 SLC15A4Q8N697 577 aa19.06■□□□□ 0.64
PNKP-203ENST00000593946 OR4K5Q8NGD3 323 aa19.06■□□□□ 0.64
PNKP-203ENST00000593946 TRIM2Q9C040 744 aa19.06■□□□□ 0.64
PNKP-203ENST00000593946 PAPOLBQ9NRJ5 636 aaKnown RBP19.06■□□□□ 0.64
PNKP-203ENST00000593946 UBAP1Q9NZ09 502 aa19.06■□□□□ 0.64
PNKP-203ENST00000593946 MGAT4BQ9UQ53 548 aa19.06■□□□□ 0.64
PNKP-203ENST00000593946 MRPS18BQ9Y676 258 aaKnown RBP19.06■□□□□ 0.64
PNKP-203ENST00000593946 ZNF264O43296 627 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 ADAP00813 363 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 ICAM2P13598 275 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 MYF6P23409 242 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 POLR2IP36954 125 aaKnown RBP19.05■□□□□ 0.64
PNKP-203ENST00000593946 FBXW4P57775 412 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 IL1RL1Q01638 556 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 TTC23Q5W5X9 447 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 PGBD2Q6P3X8 592 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 NKAIN4Q8IVV8 208 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 ACOT11Q8WXI4 607 aaPredicted RBP19.05■□□□□ 0.64
PNKP-203ENST00000593946 HGDQ93099 445 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 NR1H4Q96RI1 486 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms