RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 CRMP1Q14194 572 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 CDKN3Q16667 212 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 HENMT1Q5T8I9 393 aaKnown RBP9.88□□□□□ -0.83
RNF43-207ENST00000583753 PYHIN1Q6K0P9 492 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 FCRLAQ7L513 359 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 LRRC28Q86X40 367 aaPredicted RBP9.88□□□□□ -0.83
RNF43-207ENST00000583753 LINC00471Q8N535 108 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 ANKRD53Q8N9V6 530 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 OR56A1Q8NGH5 318 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 TSEN15Q8WW01 171 aaKnown RBP9.88□□□□□ -0.83
RNF43-207ENST00000583753 SMPDL3BQ92485 455 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 OR14A2Q96R54 314 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 ABHD1Q96SE0 405 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 TAPBPLQ9BX59 468 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.88□□□□□ -0.83
RNF43-207ENST00000583753 UBQLN3Q9H347 655 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 KLHL42Q9P2K6 505 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 FBXL4Q9UKA2 621 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 FARSAQ9Y285 508 aaKnown RBP9.88□□□□□ -0.83
RNF43-207ENST00000583753 CDHR4A6H8M9 788 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 H3BUI4 141 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 CACNB4O00305 520 aaPredicted RBP9.88□□□□□ -0.83
RNF43-207ENST00000583753 EMC8O43402 210 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 FGF18O76093 207 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 CTSLP07711 333 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 DDX6P26196 483 aaKnown RBP eCLIP9.88□□□□□ -0.831e-6■■■■■ 27.9
RNF43-207ENST00000583753 GABRA3P34903 492 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 CTNNB1P35222 781 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 SOX9P48436 509 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 AGERQ15109 404 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 C12orf73Q69YU5 71 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 TMPRSS12Q86WS5 348 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 ZNF676Q8N7Q3 588 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 ZBTB44Q8NCP5 570 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 OR4Q3Q8NH05 313 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 ABHD4Q8TB40 342 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 LGALS14Q8TCE9 139 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 ACOT11Q8WXI4 607 aaPredicted RBP9.88□□□□□ -0.83
RNF43-207ENST00000583753 THAP4Q8WY91 577 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 ST8SIA2Q92186 375 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 CREB3L1Q96BA8 519 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 PTCHD1Q96NR3 888 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 ARHGAP9Q9BRR9 750 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 RETREG1Q9H6L5 497 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 GPN1Q9HCN4 374 aaPredicted RBP9.88□□□□□ -0.83
RNF43-207ENST00000583753 CDH10Q9Y6N8 788 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 SPACA6W5XKT8 324 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 C1QTNF3-AMACRE9PGA6 284 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 SIGLEC5O15389 551 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 PRICKLE3O43900 615 aaPredicted RBP9.88□□□□□ -0.83
RNF43-207ENST00000583753 DOK2O60496 412 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 RHOP08100 348 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 TRAPPC2P0DI81 140 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 TRAPPC2BP0DI82 140 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 TEAD1P28347 426 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 GDNFP39905 211 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 RGS1Q08116 209 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 SIGLEC14Q08ET2 396 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 SQSTM1Q13501 440 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 TPBGQ13641 420 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 RAB33AQ14088 237 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 HTR3DQ70Z44 454 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 FAM220AQ7Z4H9 259 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 ZDHHC1Q8WTX9 485 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 CHFRQ96EP1 664 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 SIGLEC11Q96RL6 698 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 MS4A8Q9BY19 250 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 IGFLR1Q9H665 355 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 WDR26Q9H7D7 661 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 CALML5Q9NZT1 146 aa9.88□□□□□ -0.83
RNF43-207ENST00000583753 A0A1W2PPL8 197 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 A0A1W2PRQ8 180 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 B8ZZF3 427 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 CHP2O43745 196 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 PRKNO60260 465 aaPredicted RBP9.87□□□□□ -0.83
RNF43-207ENST00000583753 RCBTB2O95199 551 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 AIFM1O95831 613 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 ANXA7P20073 488 aaKnown RBP9.87□□□□□ -0.83
RNF43-207ENST00000583753 MNDAP41218 407 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 PCBP3P57721 371 aaKnown RBP9.87□□□□□ -0.83
RNF43-207ENST00000583753 EXOSC7Q15024 291 aaKnown RBP9.87□□□□□ -0.83
RNF43-207ENST00000583753 C2orf27AQ580R0 203 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 TCTE1Q5JU00 501 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 VITQ6UXI7 678 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 ZNF627Q7L945 461 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 TMEM150AQ86TG1 271 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 DTD2Q96FN9 168 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 ZNF514Q96K75 400 aaPredicted RBP9.87□□□□□ -0.83
RNF43-207ENST00000583753 DHRS9Q9BPW9 319 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 CPEB1Q9BZB8 566 aaKnown RBP9.87□□□□□ -0.83
RNF43-207ENST00000583753 CCDC86Q9H6F5 360 aaKnown RBP9.87□□□□□ -0.83
RNF43-207ENST00000583753 HCFC2Q9Y5Z7 792 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 TDRD15B5MCY1 1934 aaKnown RBP9.87□□□□□ -0.83
RNF43-207ENST00000583753 DOCK4Q8N1I0 1966 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 SHISA3A0PJX4 238 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 LEUTXA8MZ59 168 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 ARL6IP5O75915 188 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 OR6A2O95222 327 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 RAF1P04049 648 aa9.87□□□□□ -0.83
RNF43-207ENST00000583753 ADH5P11766 374 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms