RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 COX6B1P14854 86 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 ZNF17P17021 662 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 TPD52P55327 224 aaPredicted RBP10.68□□□□□ -0.7
RAB5C-204ENST00000547517 FOXF1Q12946 379 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 HSPB2Q16082 182 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 TMEM44Q2T9K0 475 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 TYW3Q6IPR3 259 aaKnown RBP10.68□□□□□ -0.7
RAB5C-204ENST00000547517 CBLN3Q6UW01 205 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 GRAMD2AQ8IUY3 354 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 LIX1LQ8IVB5 337 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 ZNF619Q8N2I2 560 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 MEIOBQ8N635 442 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 ARFGAP2Q8N6H7 521 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 ANKFN1Q8N957 763 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 C9orf106Q8NAJ2 232 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 LILRB4Q8NHJ6 448 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 MBD3L2Q8NHZ7 208 aaPredicted RBP10.68□□□□□ -0.7
RAB5C-204ENST00000547517 ZFP90Q8TF47 636 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 MARVELD3Q96A59 401 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 ZBTB8AQ96BR9 441 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 AURKBQ96GD4 344 aaPredicted RBP10.68□□□□□ -0.7
RAB5C-204ENST00000547517 RNF145Q96MT1 663 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 NPAS1Q99742 590 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 KCNJ16Q9NPI9 418 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 CLCF1Q9UBD9 225 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 KCNE5Q9UJ90 142 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 ZNF337Q9Y3M9 751 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 L3MBTL1Q9Y468 752 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 ARHGAP21Q5T5U3 1957 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 TEP1Q99973 2627 aaKnown RBP10.68□□□□□ -0.7
RAB5C-204ENST00000547517 PRAMEF27A3QJZ7 478 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 LINC01387J3KSC0 135 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 ZNF264O43296 627 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 UGT2B17O75795 530 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 CYP7B1O75881 506 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 H6PDO95479 791 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 CHRM4P08173 479 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 NCF2P19878 526 aaPredicted RBP10.67□□□□□ -0.7
RAB5C-204ENST00000547517 CAPN3P20807 821 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 BMP5P22003 454 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 CEACAM8P31997 349 aaPredicted RBP10.67□□□□□ -0.7
RAB5C-204ENST00000547517 TIMP3P35625 211 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 CRATP43155 626 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 ATP4BP51164 291 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 P2RX1P51575 399 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 ZNF136P52737 540 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 SUCLG1P53597 346 aaKnown RBP10.67□□□□□ -0.7
RAB5C-204ENST00000547517 SUMO3P55854 103 aaPredicted RBP10.67□□□□□ -0.7
RAB5C-204ENST00000547517 CLDN20P56880 219 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 TFF3Q07654 80 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 ZNF141Q15928 474 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 BCL2A1Q16548 175 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 SYPL1Q16563 259 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 SLC25A35Q3KQZ1 300 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 GLYR1Q49A26 553 aaPredicted RBP10.67□□□□□ -0.7
RAB5C-204ENST00000547517 AGKQ53H12 422 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 FRRS1Q6ZNA5 592 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 CHMP1BQ7LBR1 199 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 P4HA3Q7Z4N8 544 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 FUNDC1Q8IVP5 155 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 GTPBP8Q8N3Z3 284 aaPredicted RBP10.67□□□□□ -0.7
RAB5C-204ENST00000547517 RELL2Q8NC24 303 aaPredicted RBP10.67□□□□□ -0.7
RAB5C-204ENST00000547517 STON2Q8WXE9 905 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 SPDL1Q96EA4 605 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 ARSGQ96EG1 525 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 QRSL1Q9H0R6 528 aaKnown RBP10.67□□□□□ -0.7
RAB5C-204ENST00000547517 TMEM185BQ9H7F4 350 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 CALHM2Q9HA72 323 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 MED4Q9NPJ6 270 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 NPDC1Q9NQX5 325 aaPredicted RBP10.67□□□□□ -0.7
RAB5C-204ENST00000547517 POLE3Q9NRF9 147 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 ICAM5Q9UMF0 924 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 AP4B1Q9Y6B7 739 aa10.67□□□□□ -0.7
RAB5C-204ENST00000547517 ADGRG4Q8IZF6 3080 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 C7orf72A4D263 438 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 SLC22A20A6NK97 555 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 EIF1AYO14602 144 aaKnown RBP10.66□□□□□ -0.7
RAB5C-204ENST00000547517 DVL2O14641 736 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 CSTAP01040 98 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 LINGO3P0C6S8 592 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 UBTFL6P0CB48 400 aaPredicted RBP10.66□□□□□ -0.7
RAB5C-204ENST00000547517 ZCCHC18P0CG32 403 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 TMIGD3P0DMS9 266 aaPredicted RBP10.66□□□□□ -0.7
RAB5C-204ENST00000547517 TROVE2P10155 538 aaKnown RBP eCLIP10.66□□□□□ -0.7
RAB5C-204ENST00000547517 NR2F1P10589 423 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 ETFAP13804 333 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 AGFG1P52594 562 aaKnown RBP10.66□□□□□ -0.7
RAB5C-204ENST00000547517 CLDN15P56746 228 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 DSTNP60981 165 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 TXNL4AP83876 142 aaKnown RBP10.66□□□□□ -0.7
RAB5C-204ENST00000547517 GUCY1A3Q02108 690 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 CHRNEQ04844 493 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 SF3A3Q12874 501 aaKnown RBP eCLIP10.66□□□□□ -0.77e-12■■■■■ 31.3
RAB5C-204ENST00000547517 SKP2Q13309 424 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 FGFBP1Q14512 234 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 TOMM34Q15785 309 aaPredicted RBP10.66□□□□□ -0.7
RAB5C-204ENST00000547517 MAPK14Q16539 360 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 PPP4R4Q6NUP7 873 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 BLOC1S3Q6QNY0 202 aa10.66□□□□□ -0.7
RAB5C-204ENST00000547517 MEX3BQ6ZN04 569 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms