RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 SYCE1LA8MT33 242 aa7□□□□□ -1.29
LRP6-204ENST00000540415 ALG1L2C9J202 215 aa7□□□□□ -1.29
LRP6-204ENST00000540415 FAM157AC9JC47 383 aa7□□□□□ -1.29
LRP6-204ENST00000540415 ATP6V1G2-DDX39BF2Z307 99 aa7□□□□□ -1.29
LRP6-204ENST00000540415 NDUFS8O00217 210 aa7□□□□□ -1.29
LRP6-204ENST00000540415 LILRA1O75019 489 aa7□□□□□ -1.29
LRP6-204ENST00000540415 LINGO3P0C6S8 592 aa7□□□□□ -1.29
LRP6-204ENST00000540415 PABPC4LP0CB38 370 aaKnown RBP7□□□□□ -1.29
LRP6-204ENST00000540415 CREB1P16220 341 aa7□□□□□ -1.29
LRP6-204ENST00000540415 PTAFRP25105 342 aa7□□□□□ -1.29
LRP6-204ENST00000540415 APEX1P27695 318 aaKnown RBP7□□□□□ -1.29
LRP6-204ENST00000540415 GABRA3P34903 492 aa7□□□□□ -1.29
LRP6-204ENST00000540415 ZNF41P51814 821 aaPredicted RBP7□□□□□ -1.29
LRP6-204ENST00000540415 PSPHP78330 225 aa7□□□□□ -1.29
LRP6-204ENST00000540415 MRPS25P82663 173 aaKnown RBP7□□□□□ -1.29
LRP6-204ENST00000540415 LGALS3BPQ08380 585 aa7□□□□□ -1.29
LRP6-204ENST00000540415 CCNIQ14094 377 aa7□□□□□ -1.29
LRP6-204ENST00000540415 TRIP10Q15642 601 aa7□□□□□ -1.29
LRP6-204ENST00000540415 TOMM34Q15785 309 aaPredicted RBP7□□□□□ -1.29
LRP6-204ENST00000540415 ZSWIM7Q19AV6 140 aa7□□□□□ -1.29
LRP6-204ENST00000540415 MIDNQ504T8 468 aa7□□□□□ -1.29
LRP6-204ENST00000540415 ZNF544Q6NX49 715 aa7□□□□□ -1.29
LRP6-204ENST00000540415 LETMD1Q6P1Q0 360 aa7□□□□□ -1.29
LRP6-204ENST00000540415 DEF8Q6ZN54 512 aa7□□□□□ -1.29
LRP6-204ENST00000540415 ZNF662Q6ZS27 426 aa7□□□□□ -1.29
LRP6-204ENST00000540415 PEG10Q86TG7 708 aaKnown RBP7□□□□□ -1.29
LRP6-204ENST00000540415 TRABD2AQ86V40 505 aa7□□□□□ -1.29
LRP6-204ENST00000540415 CTAGE3PQ8IX95 158 aa7□□□□□ -1.29
LRP6-204ENST00000540415 KLHL7Q8IXQ5 586 aa7□□□□□ -1.29
LRP6-204ENST00000540415 FBXO27Q8NI29 283 aa7□□□□□ -1.29
LRP6-204ENST00000540415 RHEBL1Q8TAI7 183 aa7□□□□□ -1.29
LRP6-204ENST00000540415 FBXO30Q8TB52 745 aa7□□□□□ -1.29
LRP6-204ENST00000540415 FAM110BQ8TC76 370 aa7□□□□□ -1.29
LRP6-204ENST00000540415 ACTRT1Q8TDG2 376 aa7□□□□□ -1.29
LRP6-204ENST00000540415 C16orf78Q8WTQ4 265 aa7□□□□□ -1.29
LRP6-204ENST00000540415 ZFAND2BQ8WV99 257 aa7□□□□□ -1.29
LRP6-204ENST00000540415 SELENOMQ8WWX9 145 aa7□□□□□ -1.29
LRP6-204ENST00000540415 CPNE4Q96A23 557 aaPredicted RBP7□□□□□ -1.29
LRP6-204ENST00000540415 RADILQ96JH8 1075 aa7□□□□□ -1.29
LRP6-204ENST00000540415 SNX18Q96RF0 628 aa7□□□□□ -1.29
LRP6-204ENST00000540415 OSBPL9Q96SU4 736 aa7□□□□□ -1.29
LRP6-204ENST00000540415 USB1Q9BQ65 265 aaKnown RBP7□□□□□ -1.29
LRP6-204ENST00000540415 TRMOQ9BU70 441 aa7□□□□□ -1.29
LRP6-204ENST00000540415 EBPLQ9BY08 206 aa7□□□□□ -1.29
LRP6-204ENST00000540415 BCO1Q9HAY6 547 aa7□□□□□ -1.29
LRP6-204ENST00000540415 Q9N2J8 555 aa7□□□□□ -1.29
LRP6-204ENST00000540415 EQTNQ9NQ60 294 aa7□□□□□ -1.29
LRP6-204ENST00000540415 SLC35C2Q9NQQ7 365 aa7□□□□□ -1.29
LRP6-204ENST00000540415 STOML1Q9UBI4 398 aa7□□□□□ -1.29
LRP6-204ENST00000540415 ZNF225Q9UK10 706 aa7□□□□□ -1.29
LRP6-204ENST00000540415 PCTPQ9UKL6 214 aa7□□□□□ -1.29
LRP6-204ENST00000540415 C19orf53Q9UNZ5 99 aaPredicted RBP7□□□□□ -1.29
LRP6-204ENST00000540415 MGAT4BQ9UQ53 548 aa7□□□□□ -1.29
LRP6-204ENST00000540415 PMF1-BGLAPU3KQ54 211 aa7□□□□□ -1.29
LRP6-204ENST00000540415 NOTCH1P46531 2555 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 GOLGA6L10A0A0M3HER8 536 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 LOC390937A0A1W2PQ73 354 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 HMX2A2RU54 273 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 MYO1GB0I1T2 1018 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 ZNF195O14628 629 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 PCDH7O60245 1069 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 COQ9O75208 318 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 C2P06681 752 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 CRABP2P29373 138 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 APOBEC3AP31941 199 aaPredicted RBP6.99□□□□□ -1.29
LRP6-204ENST00000540415 NTF4P34130 210 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 SPRP35270 261 aaPredicted RBP6.99□□□□□ -1.29
LRP6-204ENST00000540415 HTR6P50406 440 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 NCBP2P52298 156 aaKnown RBP eCLIP6.99□□□□□ -1.29
LRP6-204ENST00000540415 CDH13P55290 713 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 CDH15P55291 814 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 TRA2BP62995 288 aaKnown RBP6.99□□□□□ -1.29
LRP6-204ENST00000540415 PHC1P78364 1004 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 CHRNB3Q05901 458 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 RASGEF1BQ0VAM2 473 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 MLC1Q15049 377 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 TRADDQ15628 312 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 NDUFAF6Q330K2 333 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 AWAT1Q58HT5 328 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 GRTP1Q5TC63 336 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 C9orf135Q5VTT2 229 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 HIST2H2BDQ6DRA6 164 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 PLD6Q8N2A8 252 aaKnown RBP6.99□□□□□ -1.29
LRP6-204ENST00000540415 ZCCHC24Q8N2G6 241 aaKnown RBP6.99□□□□□ -1.29
LRP6-204ENST00000540415 LINC01356Q8N9X3 169 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 WDR31Q8NA23 367 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 ZFP90Q8TF47 636 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 PYROXD1Q8WU10 500 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 CDKL2Q92772 493 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 MRRFQ96E11 262 aaKnown RBP6.99□□□□□ -1.29
LRP6-204ENST00000540415 OTUB1Q96FW1 271 aaPredicted RBP6.99□□□□□ -1.29
LRP6-204ENST00000540415 APIPQ96GX9 242 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 BBS4Q96RK4 519 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 VRK1Q99986 396 aaPredicted RBP6.99□□□□□ -1.29
LRP6-204ENST00000540415 LMF2Q9BU23 707 aaKnown RBP6.99□□□□□ -1.29
LRP6-204ENST00000540415 GLIPR2Q9H4G4 154 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 MYNNQ9NPC7 610 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 GIMAP4Q9NUV9 329 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 NTMQ9P121 344 aa6.99□□□□□ -1.29
LRP6-204ENST00000540415 MCM8Q9UJA3 840 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms