RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 BRIX1Q8TDN6 353 aaKnown RBP16.4■□□□□ 0.22
RAB40C-205ENST00000539661 CAPNS2Q96L46 248 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 TMPRSS13Q9BYE2 586 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 ZDHHC5Q9C0B5 715 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 UBQLN3Q9H347 655 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 WDR26Q9H7D7 661 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 ACSL5Q9ULC5 683 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 INSL5Q9Y5Q6 135 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 CASP8AP2Q9UKL3 1982 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 PLSCR5A0PG75 271 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 OR5F1O95221 314 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 TYRP1P17643 537 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 REEP5Q00765 189 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 DBPQ10586 325 aaPredicted RBP16.39■□□□□ 0.21
RAB40C-205ENST00000539661 ZNF273Q14593 569 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 ZSWIM7Q19AV6 140 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 PLBD1Q6P4A8 553 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 KANSL1Q7Z3B3 1105 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 DEFB128Q7Z7B8 93 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 NKAIN4Q8IVV8 208 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 TCEAL8Q8IYN2 117 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 SAMD8Q96LT4 415 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 IL17FQ96PD4 163 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 KLHL1Q9NR64 748 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 CREBZFQ9NS37 354 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 KIAA1549LQ6ZVL6 1849 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 PQBP1O60828 265 aaKnown RBP16.39■□□□□ 0.21
RAB40C-205ENST00000539661 TOXO94900 526 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 TFP02787 698 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 HMGN2P05204 90 aaKnown RBP16.39■□□□□ 0.21
RAB40C-205ENST00000539661 GIPP09681 153 aaPredicted RBP16.39■□□□□ 0.21
RAB40C-205ENST00000539661 TYRP14679 529 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 CPN1P15169 458 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 SELPP16109 830 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 PRKAR1BP31321 381 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 TRHRP34981 398 aaPredicted RBP16.39■□□□□ 0.21
RAB40C-205ENST00000539661 CCR8P51685 355 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 PRKAG1P54619 331 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 RAB33AQ14088 237 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 LASP1Q14847 261 aaKnown RBP16.39■□□□□ 0.21
RAB40C-205ENST00000539661 TUSC1Q2TAM9 212 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 ARSIQ5FYB1 569 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 ELFN2Q5R3F8 820 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 ASTLQ6HA08 431 aaPredicted RBP16.39■□□□□ 0.21
RAB40C-205ENST00000539661 POF1BQ8WVV4 589 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 SGTBQ96EQ0 304 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 IGSF21Q96ID5 467 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 ZNF514Q96K75 400 aaPredicted RBP16.39■□□□□ 0.21
RAB40C-205ENST00000539661 BBS4Q96RK4 519 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 DDOQ99489 341 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 IFT27Q9BW83 186 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 C1QTNF2Q9BXJ5 285 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 LDAHQ9H6V9 325 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 PLEKHA1Q9HB21 404 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 OR6C2Q9NZP2 312 aa16.39■□□□□ 0.21
RAB40C-205ENST00000539661 GPR55Q9Y2T6 319 aaPredicted RBP16.39■□□□□ 0.21
RAB40C-205ENST00000539661 FAM183AA6NL82 134 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 A8MXK9 166 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 ZNF749O43361 778 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 ECDO95905 644 aaPredicted RBP16.38■□□□□ 0.21
RAB40C-205ENST00000539661 SERPINA3P01011 423 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 HRGP04196 525 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 ASGR2P07307 311 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 TBXA2RP21731 343 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 AHRP35869 848 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 NRG3P56975 720 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 ACSM3Q53FZ2 586 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 OR10Z1Q8NGY1 313 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 DPH7Q9BTV6 452 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 QRSL1Q9H0R6 528 aaKnown RBP16.38■□□□□ 0.21
RAB40C-205ENST00000539661 SLC38A1Q9H2H9 487 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 CDCP1Q9H5V8 836 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 SAGE1Q9NXZ1 904 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 SPATA2Q9UM82 520 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 MRPS7Q9Y2R9 242 aaKnown RBP16.38■□□□□ 0.21
RAB40C-205ENST00000539661 A0A0A6YYD5 115 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 SLC22A31A6NKX4 558 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 L7N2F9 121 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 NDUFA2O43678 99 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 B3GALNT1O75752 331 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 ERGP11308 486 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 ICAM2P13598 275 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 PSMB1P20618 241 aaKnown RBP16.38■□□□□ 0.21
RAB40C-205ENST00000539661 GDNFP39905 211 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 SLC3A1Q07837 685 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 ARHGAP19Q14CB8 494 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 ZNF805Q5CZA5 627 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 RNASE12Q5GAN4 147 aaKnown RBP16.38■□□□□ 0.21
RAB40C-205ENST00000539661 PRPF38BQ5VTL8 546 aaKnown RBP16.38■□□□□ 0.21
RAB40C-205ENST00000539661 GDF7Q7Z4P5 450 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 OR11G2Q8NGC1 345 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 PMEPA1Q969W9 287 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 SLC41A3Q96GZ6 507 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 PGLYRP3Q96LB9 341 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 YIPF4Q9BSR8 244 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 GSDMCQ9BYG8 508 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 ING1Q9UK53 422 aaPredicted RBP16.38■□□□□ 0.21
RAB40C-205ENST00000539661 COL4A3Q01955 1670 aa16.38■□□□□ 0.21
RAB40C-205ENST00000539661 KIAA0355O15063 1070 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 FRS3O43559 492 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms