RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 EGLN2Q96KS0 407 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 VSTM2LQ96N03 204 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 WFIKKN1Q96NZ8 548 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 BBS4Q96RK4 519 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 RHOXF2Q9BQY4 288 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 OR2B2Q9GZK3 357 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 OPN3Q9H1Y3 402 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 MID1IP1Q9NPA3 183 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 NMRK1Q9NWW6 199 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 PPP4R1LQ9P1A2 415 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 CLCF1Q9UBD9 225 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 TRPS1Q9UHF7 1281 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 DKKL1Q9UK85 242 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF337Q9Y3M9 751 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 OR10H1Q9Y4A9 318 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 POLR3HQ9Y535 204 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 PTGDR2Q9Y5Y4 395 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 SETD2Q9BYW2 2564 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 CSPG4Q6UVK1 2322 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 ANKHD1Q8IWZ3 2542 aaKnown RBP4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 AKAP9Q99996 3911 aa4.23□□□□□ -1.73
GTF3C3-208ENST00000455546 A0A1W2PNV4 684 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 GXYLT2A0PJZ3 443 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 SH3D21A4FU49 640 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 MYO1GB0I1T2 1018 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 G3V2L1 256 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 H3BML4 177 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 UPK1AO00322 258 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 SEC14L5O43304 696 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 RIPK2O43353 540 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 FADS1O60427 444 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 CDH16O75309 829 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 BCAS2O75934 225 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 IGKV1D-16P01601 117 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 RAF1P04049 648 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 PLA2G1BP04054 148 aaKnown RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 CELA3BP08861 270 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 HSD3B1P14060 373 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF708P17019 499 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 HK1P19367 917 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 CD53P19397 219 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 DDCP20711 480 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 EFNA1P20827 205 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 CHMP24386 653 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 ATP5F1P24539 256 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 TIA1P31483 386 aaKnown RBP eCLIP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 GABRA3P34903 492 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 EVI2BP34910 448 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 GCKP35557 465 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 KRT20P35900 424 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 CPOXP36551 454 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 PEX19P40855 299 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 PNLIPRP2P54317 469 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 CLDN20P56880 219 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 SIRPAP78324 504 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 NKX6-1P78426 367 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 IL13RA1P78552 427 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 ROM1Q03395 351 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 FAPQ12884 760 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF155Q12901 538 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 CSTF3Q12996 717 aaKnown RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 HEPACAMQ14CZ8 416 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 ERCC6LQ2NKX8 1250 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 C10orf62Q5T681 223 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 RAET1LQ5VY80 246 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 CLEC6AQ6EIG7 209 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 FAM71E1Q6IPT2 247 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 PPP4R4Q6NUP7 873 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 AAGABQ6PD74 315 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 PAMR1Q6UXH9 720 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 APOOLQ6UXV4 268 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 TAOK1Q7L7X3 1001 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 CHMP1BQ7LBR1 199 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF551Q7Z340 670 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF550Q7Z398 422 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 KRTAP1-3Q8IUG1 177 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 SLC22A9Q8IVM8 553 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 GSPT2Q8IYD1 628 aaKnown RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 FAM9CQ8IZT9 166 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 CIARTQ8N365 385 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 STPG3Q8N7X2 389 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 GBP7Q8N8V2 638 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 DTX3Q8N9I9 347 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 OR2M3Q8NG83 312 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 OR4K17Q8NGC6 315 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 SMPDL3BQ92485 455 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 PIK3R3Q92569 461 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 SLC9A6Q92581 669 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 CIDECQ96AQ7 238 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 ZBTB8AQ96BR9 441 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 L3HYPDHQ96EM0 354 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 C11orf24Q96F05 449 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 SLC35A4Q96G79 324 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 DACH2Q96NX9 599 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 FAM111AQ96PZ2 611 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 BTBD9Q96Q07 612 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF382Q96SR6 550 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 NPAS1Q99742 590 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 FOXB1Q99853 325 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 KLHDC3Q9BQ90 382 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms