RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 DNAJC15Q9Y5T4 150 aa13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 FN1P02751 2386 aaKnown RBP13.51□□□□□ -0.25
CSNK1E-208ENST00000431611 SMIM23A6NLE4 172 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 INAFM1C9JVW0 142 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 KIF2AO00139 706 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 LSM1O15116 133 aaKnown RBP13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 HMGN2P05204 90 aaKnown RBP13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 DDX5P17844 614 aaKnown RBP13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 KRT4P19013 534 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 ATP5J2P56134 94 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 FOXF1Q12946 379 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 LASP1Q14847 261 aaKnown RBP13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 MLC1Q15049 377 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 ZNF239Q16600 458 aaKnown RBP13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 GALNTL6Q49A17 601 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 TDRPQ86YL5 185 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 DDIASQ8IXT1 998 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 KIF18AQ8NI77 898 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 PHOSPHO1Q8TCT1 267 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 ABHD3Q8WU67 409 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 UBLCP1Q8WVY7 318 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 AKAP1Q92667 903 aaKnown RBP eCLIP13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 CDS1Q92903 461 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 S100PBPQ96BU1 408 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 STACQ99469 402 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 TACO1Q9BSH4 297 aaKnown RBP13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 HDHD5Q9BXW7 423 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 PIGUQ9H490 435 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 PPCSQ9HAB8 311 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 DUSP22Q9NRW4 184 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 GIN1Q9NXP7 522 aa13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 NSD1Q96L73 2696 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-208ENST00000431611 KIAA1324LA8MWY0 1029 aaPredicted RBP13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 TRIM13O60858 407 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 NUDT14O95848 222 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 BCKDHAP12694 445 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 ATP6V1C1P21283 382 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 ELK4P28324 431 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 SHC1P29353 583 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 HPCAL1P37235 193 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 ZNF117Q03924 483 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 ZNF844Q08AG5 666 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 PCLAFQ15004 111 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 RNPS1Q15287 305 aaKnown RBP13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 KANK2Q63ZY3 851 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 LRIG3Q6UXM1 1119 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 MTERF4Q7Z6M4 381 aaKnown RBP13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 HOMEZQ8IX15 550 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 C4orf33Q8N1A6 199 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 ZNF527Q8NB42 609 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 RNF128Q8TEB7 428 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 CPNE4Q96A23 557 aaPredicted RBP13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 HOXD1Q9GZZ0 328 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 SIRT3Q9NTG7 399 aaPredicted RBP13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 ATP6V1HQ9UI12 483 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 LAMP3Q9UQV4 416 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 SNX8Q9Y5X2 465 aa13.49□□□□□ -0.25
CSNK1E-208ENST00000431611 GJE1A6NN92 205 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 TMEM114B3SHH9 223 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 H3BNH8 94 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 ZNF195O14628 629 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 GCM2O75603 506 aaPredicted RBP13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 PRKD3O94806 890 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 FGF4P08620 206 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 NID1P14543 1247 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 ADH6P28332 368 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 RPL3P39023 403 aaKnown RBP13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 P2RX1P51575 399 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 RPS4XP62701 263 aaKnown RBP13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 ADAM5Q6NVV9 412 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 CDC73Q6P1J9 531 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 CBLN3Q6UW01 205 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 TFAP2EQ6VUC0 442 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 NUFIP2Q7Z417 695 aaKnown RBP13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 TUSC5Q8IXB3 177 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 GABRG1Q8N1C3 465 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 LRRN4CLQ8ND94 238 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 FBXO27Q8NI29 283 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 RAB3IL1Q8TBN0 382 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 ADAMTS15Q8TE58 950 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 TWIST2Q8WVJ9 160 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 SRXN1Q9BYN0 137 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 GP6Q9HCN6 339 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 NGBQ9NPG2 151 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 KLHL13Q9P2N7 655 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 CARD8Q9Y2G2 431 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 TRAF6Q9Y4K3 522 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 RNF115Q9Y4L5 304 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 ACTL7BQ9Y614 415 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 GPC6Q9Y625 555 aaPredicted RBP13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 ARID1AO14497 2285 aa13.48□□□□□ -0.25
CSNK1E-208ENST00000431611 PCNX3Q9H6A9 2034 aa13.47□□□□□ -0.25
CSNK1E-208ENST00000431611 RAI1Q7Z5J4 1906 aaPredicted RBP13.47□□□□□ -0.25
CSNK1E-208ENST00000431611 NPIPA5A0A0B4J1W7 369 aa13.47□□□□□ -0.25
CSNK1E-208ENST00000431611 TMEM233B4DJY2 109 aa13.47□□□□□ -0.25
CSNK1E-208ENST00000431611 NPIPA7E9PJI5 369 aa13.47□□□□□ -0.25
CSNK1E-208ENST00000431611 GTPBP1O00178 669 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-208ENST00000431611 PIP5K1BO14986 540 aa13.47□□□□□ -0.25
CSNK1E-208ENST00000431611 SCAMP2O15127 329 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-208ENST00000431611 CLOCKO15516 846 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms