RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 OR1Q1Q15612 314 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 CDNFQ49AH0 187 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 FAM76BQ5HYJ3 339 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 HAGHLQ6PII5 290 aaPredicted RBP16.32■□□□□ 0.2
PTPRU-202ENST00000373779 SLC25A46Q96AG3 418 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 C16orf58Q96GQ5 468 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 RBP7Q96R05 134 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 LYSMD1Q96S90 227 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 PITX2Q99697 317 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 COQ3Q9NZJ6 369 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 PLCL2Q9UPR0 1127 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 OR5K4A6NMS3 321 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 FAM171A2A8MVW0 826 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 SLC43A1O75387 559 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 ARSBP15848 533 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 CEBPBP17676 345 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 EPHA2P29317 976 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 MMP12P39900 470 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 JSRP1Q96MG2 331 aaPredicted RBP16.32■□□□□ 0.2
PTPRU-202ENST00000373779 CMKLR1Q99788 373 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 SYNPO2LQ9H987 977 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 TMEFF2Q9UIK5 374 aaPredicted RBP16.32■□□□□ 0.2
PTPRU-202ENST00000373779 ARPC5O15511 151 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 PSMB10P40306 273 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 RIDAP52758 137 aaKnown RBP16.32■□□□□ 0.2
PTPRU-202ENST00000373779 CALHM3Q86XJ0 350 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 STX12Q86Y82 276 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 OR7G1Q8NGA0 311 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 SLC7A13Q8TCU3 470 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 ADAMTS14Q8WXS8 1223 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 WBP2Q969T9 261 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 PKMYT1Q99640 499 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 EPHX3Q9H6B9 360 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 ZNF226Q9NYT6 803 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 TRBV5-4A0A0C4DH59 114 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 ACOT7O00154 380 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 SC5DO75845 299 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 CTBP2P56545 445 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 MRPS10P82664 201 aaKnown RBP16.32■□□□□ 0.2
PTPRU-202ENST00000373779 REEP5Q00765 189 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 PSD2Q9BQI7 771 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 PELOQ9BRX2 385 aaKnown RBP16.32■□□□□ 0.2
PTPRU-202ENST00000373779 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.32■□□□□ 0.2
PTPRU-202ENST00000373779 EVA1BQ9NVM1 165 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 UBR3Q6ZT12 1888 aa16.32■□□□□ 0.2
PTPRU-202ENST00000373779 TRAV18A0A075B6X5 111 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 TRDV1A0A1B0GX56 115 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 FZD7O75084 574 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 ITGA5P08648 1049 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 H2BFMP0C1H6 154 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 DEFB103AP81534 67 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 OR5H6Q8NGV6 325 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 ZNF296Q8WUU4 475 aaPredicted RBP16.31■□□□□ 0.2
PTPRU-202ENST00000373779 NEURL2Q9BR09 285 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 SFXN1Q9H9B4 322 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 KLRF1Q9NZS2 232 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 ZAR1LA6NP61 321 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 SCGB1D2O95969 90 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 TRAPPC2P0DI81 140 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 TRAPPC2BP0DI82 140 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 CHAF1BQ13112 559 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.31■□□□□ 0.2
PTPRU-202ENST00000373779 COL28A1Q2UY09 1125 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 NXNL2Q5VZ03 156 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 SERPINA12Q8IW75 414 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 OR6T1Q8NGN1 323 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 SYNPRQ8TBG9 265 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 BRIX1Q8TDN6 353 aaKnown RBP16.31■□□□□ 0.2
PTPRU-202ENST00000373779 SLC7A6Q92536 515 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 CCDC120Q96HB5 630 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 CCL26Q9Y258 94 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 ATAD5Q96QE3 1844 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 FUT1P19526 365 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 MTNR1BP49286 362 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 AIMP2Q13155 320 aaKnown RBP16.31■□□□□ 0.2
PTPRU-202ENST00000373779 ZNF385BQ569K4 471 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 HENMT1Q5T8I9 393 aaKnown RBP16.31■□□□□ 0.2
PTPRU-202ENST00000373779 GLIPR2Q9H4G4 154 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 OR6C2Q9NZP2 312 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 EPHA6Q9UF33 1036 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 KIAA0355O15063 1070 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 MMP11P24347 488 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 MBOAT2Q6ZWT7 520 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 OR13C3Q8NGS6 347 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 PEX11GQ96HA9 241 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 AMDHD1Q96NU7 426 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 GSKIPQ9P0R6 139 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 TAAR2Q9P1P5 351 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 SCN1AP35498 2009 aa16.31■□□□□ 0.2
PTPRU-202ENST00000373779 NARSO43776 548 aaKnown RBP16.3■□□□□ 0.2
PTPRU-202ENST00000373779 BMPR1AP36894 532 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 FAPQ12884 760 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 LYPD4Q6UWN0 246 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 GKN2Q86XP6 184 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 BEST4Q8NFU0 473 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 LMX1AQ8TE12 382 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 TSNAXQ99598 290 aaKnown RBP16.3■□□□□ 0.2
PTPRU-202ENST00000373779 SLC6A7Q99884 636 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 MED20Q9H944 212 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 QSER1Q2KHR3 1735 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms