RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 FIGNL1Q6PIW4 674 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 ZNF836Q6ZNA1 936 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 PRSS45Q7RTY3 260 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 MRGPREQ86SM8 312 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 SIX5Q8N196 739 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 ACBD7Q8N6N7 88 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 OR56A1Q8NGH5 318 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 GRHL3Q8TE85 626 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 BABAM2Q9NXR7 383 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 NKIRAS2Q9NYR9 191 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 KLHL21Q9UJP4 597 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 SLC27A6Q9Y2P4 619 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 SCO1O75880 301 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 FGF19O95750 216 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 HOXD11P31277 338 aaPredicted RBP18.47■□□□□ 0.55
CRLF3-201ENST00000324238 MAB21L1Q13394 359 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 MLC1Q15049 377 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 TMEM52BQ4KMG9 183 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 DEFB134Q4QY38 66 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 BHLHB9Q6PI77 547 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 ELMOD2Q8IZ81 293 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 LINC00471Q8N535 108 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 HSD17B8Q92506 261 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 AKAP1Q92667 903 aaKnown RBP eCLIP18.47■□□□□ 0.55
CRLF3-201ENST00000324238 KXD1Q9BQD3 176 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 CRISPLD2Q9H0B8 497 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 PCBD2Q9H0N5 130 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 PROM1O43490 865 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 KAT7O95251 611 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 EML2O95834 649 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 FPR3P25089 353 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 AK4P27144 223 aaPredicted RBP18.46■□□□□ 0.55
CRLF3-201ENST00000324238 SSTR2P30874 369 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 CLPPQ16740 277 aaPredicted RBP18.46■□□□□ 0.55
CRLF3-201ENST00000324238 ANKRD54Q6NXT1 300 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 OR2L3Q8NG85 312 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 OR5W2Q8NH69 310 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 PTP4A1Q93096 173 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 GIMAP5Q96F15 307 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 IFT27Q9BW83 186 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 MKRN2Q9H000 416 aaKnown RBP18.46■□□□□ 0.55
CRLF3-201ENST00000324238 SLC9B1P1A6NJY1 282 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 EFCAB14O75071 495 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 HLA-DQB1P01920 261 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 ZNF888P0CJ79 500 aaPredicted RBP18.46■□□□□ 0.55
CRLF3-201ENST00000324238 MBOAT2Q6ZWT7 520 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 OR2L5Q8NG80 312 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 ZNF681Q96N22 645 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 ASB16Q96NS5 453 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 RPP25Q9BUL9 199 aaKnown RBP18.46■□□□□ 0.55
CRLF3-201ENST00000324238 ADAM29Q9UKF5 820 aa18.46■□□□□ 0.55
CRLF3-201ENST00000324238 ZNF443Q9Y2A4 671 aaPredicted RBP18.46■□□□□ 0.55
CRLF3-201ENST00000324238 RGS9O75916 674 aaPredicted RBP18.45■□□□□ 0.54
CRLF3-201ENST00000324238 SAGP10523 405 aaPredicted RBP18.45■□□□□ 0.54
CRLF3-201ENST00000324238 SNRPBP14678 240 aaKnown RBP18.45■□□□□ 0.54
CRLF3-201ENST00000324238 DRD5P21918 477 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 HTR2AP28223 471 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 IFNA8P32881 189 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 MAGEB1P43366 347 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 OR3A3P47888 321 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 SSX6Q7RTT6 188 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 OR11H4Q8NGC9 324 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 FANK1Q8TC84 345 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 RFT1Q96AA3 541 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 C4orf36Q96KX1 117 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 GON7Q9BXV9 100 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 NCKAP1Q9Y2A7 1128 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.45■□□□□ 0.54
CRLF3-201ENST00000324238 ZSCAN5BA6NJL1 495 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 LDB3O75112 727 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 TOXO94900 526 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 PYCR1P32322 319 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 GJA4P35212 333 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 STAT5AP42229 794 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 SRSF5Q13243 272 aaKnown RBP18.45■□□□□ 0.54
CRLF3-201ENST00000324238 ZIC1Q15915 447 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 NTRK2Q16620 822 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 ADAMTSL4Q6UY14 1074 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 OR11H7Q8NGC8 314 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 PLA2G2FQ9BZM2 168 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 MED28Q9H204 178 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 PRKAG2Q9UGJ0 569 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 IRGMA1A4Y4 181 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 H0Y8X5 98 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 CHST10O43529 356 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 IGHA1P01876 353 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 CA3P07451 260 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 IL9P15248 144 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 GIFP27352 417 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 GNA13Q14344 377 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 CST6Q15828 149 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 MRM1Q6IN84 353 aaKnown RBP18.45■□□□□ 0.54
CRLF3-201ENST00000324238 MTSS1LQ765P7 747 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 FRMD1Q8N878 549 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 CCL4L1Q8NHW4 92 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 TRMT10AQ8TBZ6 339 aaKnown RBP18.45■□□□□ 0.54
CRLF3-201ENST00000324238 ACTRT3Q9BYD9 372 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 MGAT4AQ9UM21 535 aa18.45■□□□□ 0.54
CRLF3-201ENST00000324238 ICMTO60725 284 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms