RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 CNTN5O94779 1100 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 TP53P04637 393 aaPredicted RBP11.41□□□□□ -0.58
PCF11-201ENST00000298281 HLA-EP13747 358 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 CPT2P23786 658 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 STK19P49842 368 aaPredicted RBP11.41□□□□□ -0.58
PCF11-201ENST00000298281 GGNBP1Q5YKI7 109 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 RPL7L1Q6DKI1 246 aaKnown RBP11.41□□□□□ -0.58
PCF11-201ENST00000298281 HMGN2P46Q86SG4 172 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 WDR31Q8NA23 367 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 UBAC2Q8NBM4 344 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 OR4K1Q8NGD4 311 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 PIGCQ92535 297 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 ZNF689Q96CS4 500 aaPredicted RBP11.41□□□□□ -0.58
PCF11-201ENST00000298281 SGTBQ96EQ0 304 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 SPDEFO95238 335 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 ZNF182P17025 639 aaPredicted RBP11.41□□□□□ -0.58
PCF11-201ENST00000298281 NPY1RP25929 384 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 ZNF33BQ06732 778 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 MEP1AQ16819 746 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 OGFOD3Q6PK18 319 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 ACBD7Q8N6N7 88 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 NANPQ8TBE9 248 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 FOXJ1Q92949 421 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 ARSGQ96EG1 525 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 RANBP9Q96S59 729 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 ZFYVE21Q9BQ24 234 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 ZNF251Q9BRH9 671 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 PBX4Q9BYU1 374 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 SLC17A6Q9P2U8 582 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 FAM96BQ9Y3D0 163 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 MEGF11A6BM72 1044 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 SNCAP37840 140 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 CRYZQ08257 329 aaKnown RBP11.4□□□□□ -0.58
PCF11-201ENST00000298281 SPOCK1Q08629 439 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 TMEM107Q6UX40 140 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 ASCC1Q8N9N2 400 aaKnown RBP11.4□□□□□ -0.58
PCF11-201ENST00000298281 OR2T4Q8NH00 348 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 CCDC106Q9BWC9 280 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 SHARPINQ9H0F6 387 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 ADAMTS10Q9H324 1103 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 SPHK2Q9NRA0 654 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 DCDC2BA2VCK2 349 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 NSA2O95478 260 aaKnown RBP11.4□□□□□ -0.58
PCF11-201ENST00000298281 SPTBP11277 2137 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 PROZP22891 400 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 CD1BP29016 333 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 CSN1S1P47710 185 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 BMXP51813 675 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 HK3P52790 923 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 DESI1Q6ICB0 168 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 SMOQ99835 787 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 RP1L1Q8IWN7 2480 aaPredicted RBP11.4□□□□□ -0.58
PCF11-201ENST00000298281 B4DXG7 233 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 DCNP07585 359 aaKnown RBP11.4□□□□□ -0.58
PCF11-201ENST00000298281 IL3RAP26951 378 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 HTR3AP46098 478 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 EFNA3P52797 238 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 C1orf61Q13536 156 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 ZNF542PQ5EBM4 170 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 TCTE1Q5JU00 501 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 MAMDC4Q6UXC1 1216 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 KIAA1958Q8N8K9 716 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 BRI3BPQ8WY22 251 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 TRMT2BQ96GJ1 504 aaKnown RBP11.4□□□□□ -0.58
PCF11-201ENST00000298281 TP63Q9H3D4 680 aaPredicted RBP11.4□□□□□ -0.58
PCF11-201ENST00000298281 VRTNQ9H8Y1 702 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 APMAPQ9HDC9 416 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 METTL15P1P0C7V9 234 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 POU3F2P20265 443 aaPredicted RBP11.4□□□□□ -0.58
PCF11-201ENST00000298281 ACRV1P26436 265 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 MYBPHQ13203 477 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 RABL3Q5HYI8 236 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 SYT14Q8NB59 555 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 GOT1L1Q8NHS2 421 aaPredicted RBP11.4□□□□□ -0.58
PCF11-201ENST00000298281 HSFX1Q9UBD0 423 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 CACNG4Q9UBN1 327 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 DVL2O14641 736 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 GCGRP47871 477 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 PLAC9Q5JTB6 97 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 CTSL3PQ5NE16 218 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 GRAMD2AQ8IUY3 354 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 PDZD9Q8IXQ8 264 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 LSMEM2Q8N112 164 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 OR9I1Q8NGQ6 314 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 OR13C9Q8NGT0 318 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 RAB8BQ92930 207 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 ZNF395Q9H8N7 513 aaPredicted RBP11.4□□□□□ -0.58
PCF11-201ENST00000298281 SYNPO2LQ9H987 977 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 CHRNA9Q9UGM1 479 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 SVILO95425 2214 aa11.4□□□□□ -0.58
PCF11-201ENST00000298281 UCHL1P09936 223 aa11.4□□□□□ -0.59
PCF11-201ENST00000298281 RAC1P63000 192 aa11.4□□□□□ -0.59
PCF11-201ENST00000298281 NKX3-2P78367 333 aa11.4□□□□□ -0.59
PCF11-201ENST00000298281 TDGQ13569 410 aa11.4□□□□□ -0.59
PCF11-201ENST00000298281 SERINC5Q86VE9 423 aa11.4□□□□□ -0.59
PCF11-201ENST00000298281 TEX26Q8N6G2 289 aa11.4□□□□□ -0.59
PCF11-201ENST00000298281 DOK4Q8TEW6 326 aa11.4□□□□□ -0.59
PCF11-201ENST00000298281 IMP4Q96G21 291 aaKnown RBP11.4□□□□□ -0.59
PCF11-201ENST00000298281 AKR1E2Q96JD6 320 aa11.4□□□□□ -0.59
PCF11-201ENST00000298281 SIGLEC10Q96LC7 697 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms