RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 MAKP20794 623 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 FXYD6P3P58550 94 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 PRR5P85299 388 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 RPL6Q02878 288 aaKnown RBP16.72■□□□□ 0.27
TRAF4-201ENST00000262395 CRYZQ08257 329 aaKnown RBP16.72■□□□□ 0.27
TRAF4-201ENST00000262395 ZNF77Q15935 545 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 NIPAL3Q6P499 406 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 BHLHB9Q6PI77 547 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 MBOAT2Q6ZWT7 520 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 KIAA0907Q7Z7F0 614 aaPredicted RBP16.72■□□□□ 0.27
TRAF4-201ENST00000262395 ADGRD2Q7Z7M1 963 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 LUZP2Q86TE4 346 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 PIAS4Q8N2W9 510 aaPredicted RBP16.72■□□□□ 0.27
TRAF4-201ENST00000262395 RFLNBQ8N5W9 214 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 ABHD4Q8TB40 342 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 ADAMTS15Q8TE58 950 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 MS4A6EQ96DS6 147 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 ELP4Q96EB1 424 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 LRIG1Q96JA1 1093 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 HEXA-AS1Q9H8Q6 139 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.72■□□□□ 0.276e-6■■□□□ 13.7
TRAF4-201ENST00000262395 FLVCR2Q9UPI3 526 aa16.72■□□□□ 0.27
TRAF4-201ENST00000262395 VCANP13611 3396 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 PRR23AA6NEV1 266 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 VEGFDO43915 354 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 CFDP00746 253 aaPredicted RBP16.71■□□□□ 0.27
TRAF4-201ENST00000262395 ANXA11P50995 505 aaKnown RBP16.71■□□□□ 0.27
TRAF4-201ENST00000262395 ACSM1Q08AH1 577 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 MLF2Q15773 248 aaPredicted RBP16.71■□□□□ 0.27
TRAF4-201ENST00000262395 DECR1Q16698 335 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 LGALSLQ3ZCW2 172 aaPredicted RBP16.71■□□□□ 0.27
TRAF4-201ENST00000262395 WDR88Q6ZMY6 472 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 SHISA5Q8N114 240 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 OR2A1Q8NGT9 310 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 GIMAP1Q8WWP7 306 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 INSM2Q96T92 566 aaPredicted RBP16.71■□□□□ 0.27
TRAF4-201ENST00000262395 CHIAQ9BZP6 476 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 TRIM36Q9NQ86 728 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 IGLON5A6NGN9 336 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 EMC8O43402 210 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 MPC2O95563 127 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 NPR2P20594 1047 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 ATP5A1P25705 553 aaKnown RBP16.71■□□□□ 0.27
TRAF4-201ENST00000262395 TEAD1P28347 426 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 RBMS1P29558 406 aaKnown RBP16.71■□□□□ 0.27
TRAF4-201ENST00000262395 PYCR1P32322 319 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 RFX3P48380 749 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 RGS1Q08116 209 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 EXOSC2Q13868 293 aaKnown RBP16.71■□□□□ 0.27
TRAF4-201ENST00000262395 KRT33BQ14525 404 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 ANGPT1Q15389 498 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 PLPP4Q5VZY2 271 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 SFRP4Q6FHJ7 346 aaPredicted RBP16.71■□□□□ 0.27
TRAF4-201ENST00000262395 THSD4Q6ZMP0 1018 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 MEPCEQ7L2J0 689 aaKnown RBP16.71■□□□□ 0.27
TRAF4-201ENST00000262395 ESX1Q8N693 406 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 OR56A1Q8NGH5 318 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 FANK1Q8TC84 345 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 CXorf40AQ8TE69 158 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 HMGB4Q8WW32 186 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 UBL7Q96S82 380 aaPredicted RBP16.71■□□□□ 0.27
TRAF4-201ENST00000262395 C1QTNF6Q9BXI9 259 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 PRDM7Q9NQW5 492 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 ZNF224Q9NZL3 707 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 MARK1Q9P0L2 795 aa16.71■□□□□ 0.27
TRAF4-201ENST00000262395 A0A0G2JK05 382 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 ERGP11308 486 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 PEPDP12955 493 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 ATF4P18848 351 aaPredicted RBP16.7■□□□□ 0.26
TRAF4-201ENST00000262395 AP2S1P53680 142 aaPredicted RBP16.7■□□□□ 0.26
TRAF4-201ENST00000262395 PRDX1Q06830 199 aaKnown RBP16.7■□□□□ 0.26
TRAF4-201ENST00000262395 METRNLQ641Q3 311 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 COMMD7Q86VX2 200 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 ARL14Q8N4G2 192 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 FBXL6Q8N531 539 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 OR5J2Q8NH18 312 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 OR51A7Q8NH64 312 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 GANCQ8TET4 914 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 PTP4A1Q93096 173 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 PMEPA1Q969W9 287 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 DEFB118Q96PH6 123 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 RANBP3Q9H6Z4 567 aaPredicted RBP16.7■□□□□ 0.26
TRAF4-201ENST00000262395 AUNIPQ9H7T9 357 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 TRPM6Q9BX84 2022 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 J3QRE1 110 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 KLF4O43474 513 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 CLEC3AO75596 197 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 CISD3P0C7P0 127 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 ACRP10323 421 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 HOXD10P28358 340 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 NUDT1P36639 197 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 ERVFC1P60507 584 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 ID2Q02363 134 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 PUS10Q3MIT2 529 aaKnown RBP16.7■□□□□ 0.26
TRAF4-201ENST00000262395 ACSM3Q53FZ2 586 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 SSX6Q7RTT6 188 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 SLC51BQ86UW2 128 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 OR51L1Q8NGJ5 315 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 YIPF5Q969M3 257 aa16.7■□□□□ 0.26
TRAF4-201ENST00000262395 IFT27Q9BW83 186 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms