RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 CLDN15P56746 228 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 CLDN20P56880 219 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 GUCY1A3Q02108 690 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 CHRNEQ04844 493 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 SQLEQ14534 574 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 HSPB2Q16082 182 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 MAPK14Q16539 360 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 SYPL1Q16563 259 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 GPAT3Q53EU6 434 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 AGKQ53H12 422 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 FRRS1Q6ZNA5 592 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 STON2Q8WXE9 905 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 SMPDL3BQ92485 455 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 ZG16BQ96DA0 208 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 SPDL1Q96EA4 605 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 TPT1P8Q9HAU6 139 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 KCNJ16Q9NPI9 418 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 MED4Q9NPJ6 270 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 SLC52A3Q9NQ40 469 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 ICAM5Q9UMF0 924 aa16.22■□□□□ 0.19
SNRPA1-201ENST00000254193 LINC01387J3KSC0 135 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 KIAA0513O60268 411 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 NUDT14O95848 222 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 GUSBP08236 651 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 UBL4AP11441 157 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 ETFAP13804 333 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 CAPN3P20807 821 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 ANXA11P50995 505 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 SF3A3Q12874 501 aaKnown RBP eCLIP16.21■□□□□ 0.199e-7■■■■■ 38.9
SNRPA1-201ENST00000254193 PLPPR5Q32ZL2 321 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 ADGRE4PQ86SQ3 457 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 ZNF619Q8N2I2 560 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 GTPBP8Q8N3Z3 284 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 MEIOBQ8N635 442 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 C9orf106Q8NAJ2 232 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 POC1BQ8TC44 478 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 RNF145Q96MT1 663 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 TRNT1Q96Q11 434 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 PAIP1Q9H074 479 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 SAP130Q9H0E3 1048 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 POLE3Q9NRF9 147 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 FGFR1OP2Q9NVK5 253 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 LIPT1Q9Y234 373 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 PCDHB14Q9Y5E9 798 aa16.21■□□□□ 0.19
SNRPA1-201ENST00000254193 MED12Q93074 2177 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 MBD3L4A6NDZ8 208 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 MBD3L3A6NE82 208 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 MBD3L5A6NJ08 208 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 ZNF264O43296 627 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 IL2RAP01589 272 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 OPN1LWP04000 364 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 CHRM4P08173 479 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 LINGO3P0C6S8 592 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 PSMA4P25789 261 aaKnown RBP16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 CRATP43155 626 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 P2RX1P51575 399 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 ZNF136P52737 540 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 TXNL4AP83876 142 aaKnown RBP16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 HPCAP84074 193 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 TOMM34Q15785 309 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 AP1ARQ63HQ0 302 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 TMCO5AQ8N6Q1 288 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 MBD3L2Q8NHZ7 208 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 ZBTB8AQ96BR9 441 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 ZNF524Q96C55 264 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 ARSGQ96EG1 525 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 SIKE1Q9BRV8 207 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 QRSL1Q9H0R6 528 aaKnown RBP16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 SLAMF8Q9P0V8 285 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 CLCF1Q9UBD9 225 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 AP4B1Q9Y6B7 739 aa16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 NUP214P35658 2090 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-201ENST00000254193 NCOA6Q14686 2063 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 A0A096LPI6 279 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 C7orf72A4D263 438 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 ATP8B1O43520 1251 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 BCAS1O75363 584 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 CYP7B1O75881 506 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 CSTAP01040 98 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 VIMP08670 466 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 NR2F1P10589 423 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 ZNF17P17021 662 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 BMP5P22003 454 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 CCR4P51679 360 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 AGFG1P52594 562 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 SUMO3P55854 103 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 IRX1P78414 480 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 TFF3Q07654 80 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 FOXF1Q12946 379 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 SKP2Q13309 424 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 MAPK11Q15759 364 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 PAGE3Q5JUK9 113 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 EIF3MQ7L2H7 374 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 CHMP1BQ7LBR1 199 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 GRAMD2AQ8IUY3 354 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 OR5W2Q8NH69 310 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 GPR119Q8TDV5 335 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 WNT2BQ93097 391 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 MARVELD3Q96A59 401 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 UCN2Q96RP3 112 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms