RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 PAPD4Q6PIY7 484 aaKnown RBP16.7■□□□□ 0.26
VIM-201ENST00000224237 CPEB2Q7Z5Q1 589 aaKnown RBP16.7■□□□□ 0.26
VIM-201ENST00000224237 APCDD1LQ8NCL9 501 aa16.7■□□□□ 0.26
VIM-201ENST00000224237 NFAM1Q8NET5 270 aaPredicted RBP16.7■□□□□ 0.26
VIM-201ENST00000224237 TMEM255BQ8WV15 326 aa16.7■□□□□ 0.26
VIM-201ENST00000224237 MR1Q95460 341 aa16.7■□□□□ 0.26
VIM-201ENST00000224237 TRIM2Q9C040 744 aa16.7■□□□□ 0.26
VIM-201ENST00000224237 NRSN2Q9GZP1 204 aa16.7■□□□□ 0.26
VIM-201ENST00000224237 RASSF1Q9NS23 344 aa16.7■□□□□ 0.26
VIM-201ENST00000224237 RNF6Q9Y252 685 aa16.7■□□□□ 0.26
VIM-201ENST00000224237 ABCB7O75027 752 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 UTS2O95399 124 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 SOX14O95416 240 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 POU1F1P28069 291 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 ACAA2P42765 397 aaKnown RBP16.69■□□□□ 0.26
VIM-201ENST00000224237 OMPP47874 163 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 RNF4P78317 190 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 PLCXD2Q0VAA5 305 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 TSPAN31Q12999 210 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 FAM198BQ6UWH4 519 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 ZNF517Q6ZMY9 492 aaPredicted RBP16.69■□□□□ 0.26
VIM-201ENST00000224237 SLCO6A1Q86UG4 719 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 SLC34A3Q8N130 599 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 LSMEM1Q8N8F7 131 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 BPIFB6Q8NFQ5 453 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 TP53INP1Q96A56 240 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 VMP1Q96GC9 406 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 ADOQ96SZ5 270 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 PRSS27Q9BQR3 290 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 LRFN3Q9BTN0 628 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 IMPAD1Q9NX62 359 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 NCDNQ9UBB6 729 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 MUC6Q6W4X9 2439 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 CUL9Q8IWT3 2517 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 A0A0B4J2E0 115 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 TEX51A0A1B0GUA7 166 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 A0A1B0GX12 115 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 CDC14CA4D256 554 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 REM1O75628 298 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 ETV5P41161 510 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 CSRP2Q16527 193 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 FAM69BQ5VUD6 431 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 FAM199XQ6PEV8 388 aaPredicted RBP16.69■□□□□ 0.26
VIM-201ENST00000224237 ZNF773Q6PK81 442 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 HSDL2Q6YN16 418 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 PRICKLE2Q7Z3G6 844 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 P3H2Q8IVL5 708 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 ZNF440Q8IYI8 595 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 RNF113BQ8IZP6 322 aaKnown RBP16.69■□□□□ 0.26
VIM-201ENST00000224237 GPA33Q99795 319 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 WDR77Q9BQA1 342 aaPredicted RBP16.69■□□□□ 0.26
VIM-201ENST00000224237 ZPBPQ9BS86 351 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 B3GALT1Q9Y5Z6 326 aa16.69■□□□□ 0.26
VIM-201ENST00000224237 CHP2O43745 196 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 MPZL2O60487 215 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 TSPAN2O60636 221 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 TP53P04637 393 aaPredicted RBP16.68■□□□□ 0.26
VIM-201ENST00000224237 TBXA2RP21731 343 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 FPR3P25089 353 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 ABCD3P28288 659 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 GSTT1P30711 240 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 FMO3P31513 532 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 TEKQ02763 1124 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 ISXQ2M1V0 245 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 NADK2Q4G0N4 442 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 FNDC7Q5VTL7 733 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 BROXQ5VW32 411 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 BORAQ6PGQ7 559 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 RAB11FIP2Q7L804 512 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 NRMQ8IXM6 262 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 PRR22Q8IZ63 422 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 NLGN4XQ8N0W4 816 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 FAM71CQ8NEG0 241 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 NUBPLQ8TB37 319 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 APH1BQ8WW43 257 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 UBE2FQ969M7 185 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 LIN37Q96GY3 246 aaPredicted RBP16.68■□□□□ 0.26
VIM-201ENST00000224237 FAM46AQ96IP4 442 aaKnown RBP16.68■□□□□ 0.26
VIM-201ENST00000224237 POLR1BQ9H9Y6 1135 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 TOR4AQ9NXH8 423 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 SCN3BQ9NY72 215 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 FLRT3Q9NZU0 649 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 ZNF223Q9UK11 482 aaPredicted RBP16.68■□□□□ 0.26
VIM-201ENST00000224237 TPRKBQ9Y3C4 175 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 PCDHGA1Q9Y5H4 931 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 COMMD3-BMI1R4GMX3 469 aa16.68■□□□□ 0.26
VIM-201ENST00000224237 ADAM11O75078 769 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 WBP4O75554 376 aaKnown RBP16.67■□□□□ 0.26
VIM-201ENST00000224237 LYPD3O95274 346 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 TGM1P22735 817 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 PNLIPRP2P54317 469 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 SH3BGRP55822 239 aaPredicted RBP16.67■□□□□ 0.26
VIM-201ENST00000224237 NRG3P56975 720 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 CSNK2BP67870 215 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 NCF4Q15080 339 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 CDCP2Q5VXM1 449 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 SLX4IPQ5VYV7 408 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 TMEM236Q5W0B7 351 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 RHOXF1Q8NHV9 184 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 RNF217Q8TC41 542 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms