RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 IL7RP16871 459 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 PRKAR1BP31321 381 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 ADH7P40394 386 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 PTGDSP41222 190 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 DMTNQ08495 405 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 FGFBP1Q14512 234 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 LARS2Q15031 903 aaKnown RBP18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 PLEKHN1Q494U1 663 aaPredicted RBP18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 LIN52Q52LA3 116 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 LRRC23Q53EV4 343 aaPredicted RBP18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 FNDC7Q5VTL7 733 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 LCN8Q6JVE9 175 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 SLC30A6Q6NXT4 461 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 Q6ZS92 163 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 HMGN2P46Q86SG4 172 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 VRK2Q86Y07 508 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 CMIPQ8IY22 773 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 CATSPER1Q8NEC5 780 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 WDR60Q8WVS4 1066 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 FAM162AQ96A26 154 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 ANGPTL4Q9BY76 406 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 KLRF1Q9NZS2 232 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 SEC14L3Q9UDX4 400 aa18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 ZNF443Q9Y2A4 671 aaPredicted RBP18.14■□□□□ 0.5
PDLIM2-221ENST00000622702 ZNF462Q96JM2 2506 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 P04436 131 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 CD46P15529 392 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 ENDOUP21128 410 aaKnown RBP18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 GAS1P54826 345 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 EEF1A1P68104 462 aaKnown RBP18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 ZSWIM7Q19AV6 140 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 ZNF311Q5JNZ3 666 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 RNF220Q5VTB9 566 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 BICRALQ6AI39 1079 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 SLC25A25Q6KCM7 469 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 DHRS4L2Q6PKH6 230 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 ZNF605Q86T29 641 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 DHFR2Q86XF0 187 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 MISPQ8IVT2 679 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 EID3Q8N140 333 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 ZNF614Q8N883 585 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 BHLHE22Q8NFJ8 381 aaPredicted RBP18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 RASSF5Q8WWW0 418 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 SCMH1Q96GD3 660 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 NSMCE2Q96MF7 247 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 RNF145Q96MT1 663 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 FRMD6Q96NE9 622 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 OSBPL11Q9BXB4 747 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 RSPO3Q9BXY4 272 aaPredicted RBP18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 RTN4RQ9BZR6 473 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 PROK2Q9HC23 129 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 PCDHGB6Q9Y5F9 930 aa18.14■□□□□ 0.49
PDLIM2-221ENST00000622702 TRAV17A0A0B4J275 112 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 H3BNH8 94 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 NDUFB5O43674 189 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 SNX4O95219 450 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 OPN1SWP03999 348 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 SP1P08047 785 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 ATP6V1B2P21281 511 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 KCNJ5P48544 419 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 KCNJ10P78508 379 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 CD226Q15762 336 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 CYBRD1Q53TN4 286 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 PRAMEF20Q5VT98 475 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 CBLL1Q75N03 491 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 MARCH3Q86UD3 253 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 Q8NA96 180 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 SLC26A7Q8TE54 656 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 C5orf34Q96MH7 638 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 RAB3IPQ96QF0 476 aaPredicted RBP18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 PINK1Q9BXM7 581 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 HHATLQ9HCP6 504 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 DCAF13Q9NV06 445 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 SLC35A3Q9Y2D2 325 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 CHST2Q9Y4C5 530 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 WIF1Q9Y5W5 379 aa18.13■□□□□ 0.49
PDLIM2-221ENST00000622702 CFAP73A6NFT4 308 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 TMEM229AB2RXF0 380 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 SCO2O43819 266 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 NME2P1O60361 137 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 STAMBPO95630 424 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 ANGPTL1O95841 491 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 SERPINA1P01009 418 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 NQO1P15559 274 aaKnown RBP18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 CD247P20963 164 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 CNR1P21554 472 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 NME2P22392 152 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 DUSP7Q16829 419 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 MTX3Q5HYI7 312 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 MRPL2Q5T653 305 aaKnown RBP18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 ZNF836Q6ZNA1 936 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 EIF3MQ7L2H7 374 aaKnown RBP18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 SMYD1Q8NB12 490 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 FAM71CQ8NEG0 241 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 DOHHQ9BU89 302 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 TRIM15Q9C019 465 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 ARMC7Q9H6L4 198 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 GALNT9Q9HCQ5 603 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms