RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 PILRAQ9UKJ1 303 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC7A7Q9UM01 511 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 WBP11Q9Y2W2 641 aaKnown RBP3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 NBASA2RRP1 2371 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 CNTRLQ7Z7A1 2325 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 MACROD2A1Z1Q3 448 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 HEATR9A2RTY3 570 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 A6NL46 340 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 PDZK1P1A8MUH7 402 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 A8MV72 311 aaPredicted RBP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 AP3B1O00203 1094 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 AHCYL1O43865 530 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 MTX2O75431 263 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 POP7O75817 140 aaKnown RBP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 AP2A2O94973 939 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 GAS8-AS1O95177 125 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 PGM3O95394 542 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 BCL10O95999 233 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 CCDC175P0C221 793 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 RALBP11234 206 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 SFTPCP11686 197 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 ATP1B2P14415 290 aaPredicted RBP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 NELFEP18615 380 aaKnown RBP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 CHRNB4P30926 498 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 NSG1P42857 185 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 CAPZBP47756 277 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 CD151P48509 253 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 NR0B1P51843 470 aaKnown RBP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 CDH11P55287 796 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 CDK16Q00536 496 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 PLOD1Q02809 727 aaPredicted RBP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 CACNG1Q06432 222 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 CDH17Q12864 832 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 ITIH4Q14624 930 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 SIX1Q15475 284 aaPredicted RBP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 TGIF1Q15583 401 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 TMEM30BQ3MIR4 351 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 KIAA1644Q3SXP7 199 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 CEP85LQ5SZL2 805 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 DCAF12Q5T6F0 453 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 SEL1L2Q5TEA6 688 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 NKAIN2Q5VXU1 208 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 FAM53AQ6NSI3 398 aaPredicted RBP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 TEX38Q6PEX7 206 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 TMEM220Q6QAJ8 160 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 CORO6Q6QEF8 472 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 C4orf22Q6V702 233 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 CERS6Q6ZMG9 384 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZNF554Q86TJ5 538 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZFAND4Q86XD8 727 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC13A5Q86YT5 568 aaPredicted RBP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 TRAPPC5Q8IUR0 188 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 APLFQ8IW19 511 aaPredicted RBP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 LRRC8AQ8IWT6 810 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 SPC24Q8NBT2 197 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR13C4Q8NGS5 318 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 GDAP1Q8TB36 358 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 RNF128Q8TEB7 428 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 MAIP1Q8WWC4 291 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 TMEM190Q8WZ59 177 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 ART4Q93070 314 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 SGF29Q96ES7 293 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 MED8Q96G25 268 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC45A3Q96JT2 553 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 CATSPER2Q96P56 530 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 COPS8Q99627 209 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 LITAFQ99732 161 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 CCM2Q9BSQ5 444 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 DESI2Q9BSY9 194 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 TMEM121Q9BTD3 319 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 TRAF4Q9BUZ4 470 aaPredicted RBP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 FNDC11Q9BVV2 318 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 RBM4Q9BWF3 364 aaKnown RBP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 TBC1D10AQ9BXI6 508 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 DPAGT1Q9H3H5 408 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 KIR3DX1Q9H7L2 352 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 SUDS3Q9H7L9 328 aaPredicted RBP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 C10orf88Q9H8K7 445 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 VPS37BQ9H9H4 285 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 SYTL2Q9HCH5 934 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 HOMER3Q9NSC5 361 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC39A1Q9NY26 324 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 MRPL15Q9P015 296 aaKnown RBP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 TMEM9Q9P0T7 183 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 PACSIN2Q9UNF0 486 aaPredicted RBP3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 WDR37Q9Y2I8 494 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 SNX8Q9Y5X2 465 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 HEBP2Q9Y5Z4 205 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 ARL5AQ9Y689 179 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 COLEC10Q9Y6Z7 277 aa3.23□□□□□ -1.89
CKS1BP3-201ENST00000600888 NAV2Q8IVL1 2488 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 FLNCQ14315 2725 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 BOD1L1Q8NFC6 3051 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 UBR5O95071 2799 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 TENM4Q6N022 2769 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 IGLV9-49A0A0B4J1Y8 123 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 A0A1W2PRB8 838 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC5A10A0PJK1 596 aa3.22□□□□□ -1.89
CKS1BP3-201ENST00000600888 TLCD2A6NGC4 264 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms