RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 LOC100130705A0A1B0GUX0 176 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 REM1O75628 298 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 DKK1O94907 266 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 UMODP07911 640 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 CBLP22681 906 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 KRT20P35900 424 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 SLC26A5P58743 744 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 HOXC5Q00444 222 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 KLHL26Q53HC5 615 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 PODNL1Q6PEZ8 512 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 SLC34A3Q8N130 599 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 TOR1AIP2Q8NFQ8 470 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 OR9Q2Q8NGE9 314 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 CNOT9Q92600 299 aaKnown RBP16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 MESP1Q9BRJ9 268 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 NRSN2Q9GZP1 204 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 RIBC2Q9H4K1 309 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 CTPS2Q9NRF8 586 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 MAN2C1Q9NTJ4 1040 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 TESQ9UGI8 421 aaKnown RBP16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 ZNF223Q9UK11 482 aaPredicted RBP16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 MGAT4BQ9UQ53 548 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 PCDHGB5Q9Y5G0 923 aa16.27■□□□□ 0.19
SHKBP1-224ENST00000600718 PMS2P1A4D2B8 440 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 SERINC4A6NH21 518 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 C9orf172C9J069 976 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 SEC24DO94855 1032 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 IGHEP01854 428 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 ADH7P40394 386 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 SEC23BQ15437 767 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 ZNF550Q7Z398 422 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 AQP11Q8NBQ7 271 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 OR5L2Q8NGL0 311 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 NUBPLQ8TB37 319 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 ADAMTS16Q8TE57 1224 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 SLC38A4Q969I6 547 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 C8orf44Q96CB5 159 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 ZNF559Q9BR84 538 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 GRIP2Q9C0E4 1043 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 PNPLA3Q9NST1 481 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 FRYLO94915 3013 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 A0A1W2PNU3 283 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 OR10H3O60404 316 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 TSPAN2O60636 221 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 UTS2O95399 124 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 CLIC3O95833 236 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 GASTP01350 101 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 RAB40ALP0C0E4 278 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 GKN3PP0CG01 181 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 PRG2P13727 222 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 IL12BP29460 328 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 POLR2IP36954 125 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 FOLR3P41439 243 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 LIMK1P53667 647 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 IL18R1Q13478 541 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 CACTIN-AS1Q8N1I8 211 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 SLC41A3Q96GZ6 507 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 MUS81Q96NY9 551 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 NIPSNAP1Q9BPW8 284 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 GABARAPL3Q9BY60 117 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 DNAJB12Q9NXW2 375 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 ENOPH1Q9UHY7 261 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 SLC35A3Q9Y2D2 325 aa16.26■□□□□ 0.19
SHKBP1-224ENST00000600718 DMDP11532 3685 aa16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 CDC14CA4D256 554 aa16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 SCDO00767 359 aa16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 ABCB7O75027 752 aa16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 BCAS1O75363 584 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 ADAP00813 363 aa16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 HPGDP15428 266 aa16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 TBXA2RP21731 343 aa16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 RNF144AP50876 292 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 PNLIPRP2P54317 469 aa16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 PLAURQ03405 335 aa16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 PLCXD2Q0VAA5 305 aa16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 NPRL3Q12980 569 aa16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 TIPARPQ7Z3E1 657 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 OMA1Q96E52 524 aa16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 ADOQ96SZ5 270 aa16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 ZNF700Q9H0M5 742 aa16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 NTNG1Q9Y2I2 539 aa16.25■□□□□ 0.19
SHKBP1-224ENST00000600718 TRBV11-1A0A0K0K1C0 115 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 TRAPPC13A5PLN9 417 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 ZFAND5O76080 213 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 TNFAIP8O95379 198 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 CSTAP01040 98 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 NRG3P56975 720 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 MYBPC1Q00872 1141 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 KEAP1Q14145 624 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 OR1Q1Q15612 314 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 GDF7Q7Z4P5 450 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 ZNF440Q8IYI8 595 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 PRR22Q8IZ63 422 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 C8orf59Q8N0T1 100 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 PARP8Q8N3A8 854 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 DGCR6LQ9BY27 220 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 B3GNT4Q9C0J1 378 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 TMEM27Q9HBJ8 222 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 CACNA1HO95180 2353 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms