RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 RIT1Q92963 219 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 EXOC4Q96A65 974 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 SIPA1Q96FS4 1042 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 PCED1BQ96HM7 432 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 EPSTI1Q96J88 318 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 TNFRSF13CQ96RJ3 184 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 INTS14Q96SY0 518 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 KCNK16Q96T55 309 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 PCDHB18PQ96TA0 734 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 PKMYT1Q99640 499 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 MAPKAP1Q9BPZ7 522 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 MED10Q9BTT4 135 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 GPR174Q9BXC1 333 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 NACA2Q9H009 215 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 BLZF1Q9H2G9 400 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 NMUR1Q9HB89 426 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 TRPV5Q9NQA5 729 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 FAM49BQ9NUQ9 324 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 MRGBPQ9NV56 204 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 EXOC1Q9NV70 894 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 DNAJC17Q9NVM6 304 aaKnown RBP2.36□□□□□ -2.03
SCFD1-219ENST00000556413 RBAKQ9NYW8 714 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-219ENST00000556413 GCNT4Q9P109 453 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 NOCTQ9UK39 431 aaKnown RBP2.36□□□□□ -2.03
SCFD1-219ENST00000556413 MMP17Q9ULZ9 603 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 NOL7Q9UMY1 257 aaKnown RBP2.36□□□□□ -2.03
SCFD1-219ENST00000556413 NCKAP1Q9Y2A7 1128 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 CA5BQ9Y2D0 317 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 KIF26AQ9ULI4 1882 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-219ENST00000556413 NBEAQ8NFP9 2946 aa2.36□□□□□ -2.03
SCFD1-219ENST00000556413 CHD6Q8TD26 2715 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 ATG2BQ96BY7 2078 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 ZSCAN5CA6NGD5 496 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-219ENST00000556413 SELENOFO60613 162 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 HUS1O60921 280 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 TSC22D2O75157 780 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 PGLSO95336 258 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 MOCS2O96007 188 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-219ENST00000556413 OAS1P00973 400 aaKnown RBP2.35□□□□□ -2.03
SCFD1-219ENST00000556413 APODP05090 189 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 CSRP1P21291 193 aaKnown RBP2.35□□□□□ -2.03
SCFD1-219ENST00000556413 ANXA13P27216 316 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 SRD5A2P31213 254 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 TUFMP49411 452 aaKnown RBP2.35□□□□□ -2.03
SCFD1-219ENST00000556413 CSNK1EP49674 416 aaKnown RBP2.35□□□□□ -2.03
SCFD1-219ENST00000556413 SGSHP51688 502 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 METAP1P53582 386 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 MAP3K7CLP57077 242 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 MYL6P60660 151 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 RPL10AP62906 217 aaKnown RBP2.35□□□□□ -2.03
SCFD1-219ENST00000556413 GFPT1Q06210 699 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-219ENST00000556413 SRSF6Q13247 344 aaKnown RBP2.35□□□□□ -2.03
SCFD1-219ENST00000556413 PCK2Q16822 640 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 FUT11Q495W5 492 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 C9orf129Q5T035 196 aaKnown RBP2.35□□□□□ -2.03
SCFD1-219ENST00000556413 RFWD3Q6PCD5 774 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 C17orf107Q6ZR85 190 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 Q71RC1 249 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-219ENST00000556413 SLFN11Q7Z7L1 901 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 CREBRFQ8IUR6 639 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 SYCP3Q8IZU3 236 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 THEM5Q8N1Q8 247 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 SPATA18Q8TC71 538 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 SPPL2BQ8TCT7 592 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 WFDC5Q8TCV5 224 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 FBXO32Q969P5 355 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 CCDC127Q96BQ5 260 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 HPDLQ96IR7 371 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 AK8Q96MA6 479 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 ZNF560Q96MR9 790 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 BBS2Q9BXC9 721 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 UBQLN3Q9H347 655 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 DPEP2Q9H4A9 486 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 SP140LQ9H930 580 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 PARVGQ9HBI0 331 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 PLSCR3Q9NRY6 295 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 GIMAP2Q9UG22 337 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 ITGA11Q9UKX5 1188 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 MGAT4AQ9UM21 535 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 NEUROG3Q9Y4Z2 214 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 ASB3Q9Y575 518 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 PCDHGA1Q9Y5H4 931 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 CACNA1EQ15878 2313 aa2.35□□□□□ -2.03
SCFD1-219ENST00000556413 BSNQ9UPA5 3926 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 SPENQ96T58 3664 aaKnown RBP2.34□□□□□ -2.03
SCFD1-219ENST00000556413 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 CEP295Q9C0D2 2601 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 GOLGA6L7A0A1B0GV03 622 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 LOC390937A0A1W2PQ73 354 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 TRABD2BA6NFA1 517 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 A8MXQ7 604 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 HMGB1P1B2RPK0 211 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-219ENST00000556413 KRTAP4-16G5E9R7 235 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-219ENST00000556413 H3BQV1 296 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 E2F3O00716 465 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 TNFSF11O14788 317 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 AKAP3O75969 853 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 FGF19O95750 216 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 ANGPTL1O95841 491 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 IGHG3P01860 377 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms