RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 PCNX1Q96RV3 2341 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 MED12Q93074 2177 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 CENPVL1A0A0U1RR11 272 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 FAM234BA2RU67 622 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 OR2M5A3KFT3 312 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 NKX2-6A6NCS4 301 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 FAM47E-STBD1D6RA91 191 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 H3BML4 177 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 C19orf84I3L1E1 186 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 NR5A2O00482 541 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 SEC14L5O43304 696 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 EDF1O60869 148 aaKnown RBP10.7□□□□□ -0.7
RAB5C-204ENST00000547517 ANP32DO95626 131 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 AGR2O95994 175 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 CPN1P15169 458 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 ZNF708P17019 499 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 CHMP24386 653 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 ZNF41P51814 821 aaPredicted RBP10.7□□□□□ -0.7
RAB5C-204ENST00000547517 ATP12AP54707 1039 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 CLDN18P56856 261 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 HPCAP84074 193 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 ZNF117Q03924 483 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 FUT5Q11128 374 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 SF3B4Q15427 424 aaKnown RBP eCLIP10.7□□□□□ -0.79e-6■□□□□ 11.2
RAB5C-204ENST00000547517 GPR68Q15743 365 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 ARHGAP11BQ3KRB8 267 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 GTDC1Q4AE62 458 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 HSP90B2PQ58FF3 399 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 C6orf10Q5SRN2 563 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 PDZK1Q5T2W1 519 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 NSUN5P2Q63ZY6 315 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 HEPHL1Q6MZM0 1159 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 MSANTD1Q6ZTZ1 278 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 TMCO5AQ8N6Q1 288 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 TNIP2Q8NFZ5 429 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 B4GALNT2Q8NHY0 566 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 RFWD2Q8NHY2 731 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 SMPDL3BQ92485 455 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 ITCHQ96J02 903 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 KLHDC3Q9BQ90 382 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 PIGQQ9BRB3 760 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 UCK2Q9BZX2 261 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 ZNF350Q9GZX5 532 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 RMND5AQ9H871 391 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 HHATLQ9HCP6 504 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 CHST11Q9NPF2 352 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 DCTN4Q9UJW0 460 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 MKLN1Q9UL63 735 aa10.7□□□□□ -0.7
RAB5C-204ENST00000547517 KIAA1549Q9HCM3 1950 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 CD8B2A6NJW9 211 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 CLCA1A8K7I4 914 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 NPIPB9F8W1W9 429 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 H3BNH8 94 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 HMGN4O00479 90 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 OIP5O43482 229 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 KIAA0513O60268 411 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 FCMRO60667 390 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 STX11O75558 287 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 TOXO94900 526 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 NUDT14O95848 222 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 EPPINO95925 133 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 SNRPB2P08579 225 aaKnown RBP10.69□□□□□ -0.7
RAB5C-204ENST00000547517 UBL4AP11441 157 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 MSX1P28360 303 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 MRPL19P49406 292 aaKnown RBP10.69□□□□□ -0.7
RAB5C-204ENST00000547517 ANXA11P50995 505 aaKnown RBP10.69□□□□□ -0.7
RAB5C-204ENST00000547517 CCR4P51679 360 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 SQLEQ14534 574 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 PLPPR5Q32ZL2 321 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 GPAT3Q53EU6 434 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 KLHL26Q53HC5 615 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 COX20Q5RI15 118 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 SP5Q6BEB4 398 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-204ENST00000547517 SLC2A7Q6PXP3 512 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 PLXDC2Q6UX71 529 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 HMGN2P46Q86SG4 172 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 NAXEQ8NCW5 288 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 ZPLD1Q8TCW7 415 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 ROPN1LQ96C74 230 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 NMUR2Q9GZQ4 415 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 SLC6A13Q9NSD5 602 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 MED17Q9NVC6 651 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 CCDC167Q9P0B6 97 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 CARD8Q9Y2G2 431 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 WDR45Q9Y484 360 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 DTNAQ9Y4J8 743 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 CACNA1CQ13936 2221 aa10.69□□□□□ -0.7
RAB5C-204ENST00000547517 A0A087WZY1 265 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 A0A0G2JND7 137 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 MBD3L4A6NDZ8 208 aaPredicted RBP10.68□□□□□ -0.7
RAB5C-204ENST00000547517 MBD3L3A6NE82 208 aaPredicted RBP10.68□□□□□ -0.7
RAB5C-204ENST00000547517 SERINC4A6NH21 518 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 MBD3L5A6NJ08 208 aaPredicted RBP10.68□□□□□ -0.7
RAB5C-204ENST00000547517 HSPB2A8KAH6 182 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 H0YC42 278 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 GTPBP1O00178 669 aaKnown RBP10.68□□□□□ -0.7
RAB5C-204ENST00000547517 HNRNPRO43390 633 aaKnown RBP10.68□□□□□ -0.7
RAB5C-204ENST00000547517 KRT75O95678 551 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 IL2RAP01589 272 aa10.68□□□□□ -0.7
RAB5C-204ENST00000547517 PEPDP12955 493 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms