RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 CNEP1R1Q8N9A8 125 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 CDRT4Q8N9R6 151 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 GATSQ8NAP1 163 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 CEP70Q8NHQ1 597 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 ZFP28Q8NHY6 868 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 AGR3Q8TD06 166 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.65□□□□□ -0.78e-6■■■■□ 19.7
GABPB1-206ENST00000543881 TRIM44Q96DX7 344 aaPredicted RBP10.65□□□□□ -0.7
GABPB1-206ENST00000543881 ZBED6CLQ96FA7 236 aaPredicted RBP10.65□□□□□ -0.7
GABPB1-206ENST00000543881 C3orf30Q96M34 536 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 PIGQQ9BRB3 760 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 MED18Q9BUE0 208 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 OPN3Q9H1Y3 402 aaPredicted RBP10.65□□□□□ -0.7
GABPB1-206ENST00000543881 RNF122Q9H9V4 155 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 C3orf14Q9HBI5 128 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 TMED5Q9Y3A6 229 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 LINC01387J3KSC0 135 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 EMC8O43402 210 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 AQP8O94778 261 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 CHEK2O96017 543 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 C8BP07358 591 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 NUDT17P0C025 328 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 NID1P14543 1247 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 CCKARP32238 428 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 KRTAP1-1Q07627 177 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 PON3Q15166 354 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.64□□□□□ -0.71
GABPB1-206ENST00000543881 XKR7Q5GH72 579 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 CCNJQ5T5M9 372 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 SZRD1Q7Z422 152 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 METTL25Q8N6Q8 603 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 OR7A2PQ8NGA2 310 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 TCP10LQ8TDR4 215 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 FAM120BQ96EK7 910 aaKnown RBP10.64□□□□□ -0.71
GABPB1-206ENST00000543881 PGM2Q96G03 612 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 MS4A4EQ96PG1 132 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 HS3ST6Q96QI5 342 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 IQCGQ9H095 443 aaKnown RBP10.64□□□□□ -0.71
GABPB1-206ENST00000543881 LGALS13Q9UHV8 139 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 ATP6V1HQ9UI12 483 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 VDAC3Q9Y277 283 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 ZNF175Q9Y473 711 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 AP4B1Q9Y6B7 739 aa10.64□□□□□ -0.71
GABPB1-206ENST00000543881 SONP18583 2426 aaKnown RBP10.64□□□□□ -0.71
GABPB1-206ENST00000543881 NDUFB5O43674 189 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 PEX11AO75192 247 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 NGFRP08138 427 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 LAMP1P11279 417 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 TBXA2RP21731 343 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 PSMA4P25789 261 aaKnown RBP10.63□□□□□ -0.71
GABPB1-206ENST00000543881 CD79BP40259 229 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 ASMTP46597 345 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 SLC6A8P48029 635 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 PCYT1AP49585 367 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 EEFSECP57772 596 aaKnown RBP10.63□□□□□ -0.71
GABPB1-206ENST00000543881 MLC1Q15049 377 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 VPS26BQ4G0F5 336 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 C22orf34Q6ZV56 151 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 PLEKHM3Q6ZWE6 761 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 RIBC1Q8N443 379 aaPredicted RBP10.63□□□□□ -0.71
GABPB1-206ENST00000543881 ZNF610Q8N9Z0 462 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 OR6Y1Q8NGX8 325 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 MTERF3Q96E29 417 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 MARK4Q96L34 752 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 ZDHHC2Q9UIJ5 367 aa10.63□□□□□ -0.71
GABPB1-206ENST00000543881 A0A1W2PRB8 838 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 SCAMP2O15127 329 aaKnown RBP10.62□□□□□ -0.71
GABPB1-206ENST00000543881 SLU7O95391 586 aaKnown RBP10.62□□□□□ -0.71
GABPB1-206ENST00000543881 OPN1LWP04000 364 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 HMGN2P05204 90 aaKnown RBP10.62□□□□□ -0.71
GABPB1-206ENST00000543881 ALOX5P09917 674 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 PAX1P15863 534 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 LOXP28300 417 aaPredicted RBP10.62□□□□□ -0.71
GABPB1-206ENST00000543881 DMTNQ08495 405 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 TNK1Q13470 666 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 CAPRIN1Q14444 709 aaKnown RBP10.62□□□□□ -0.71
GABPB1-206ENST00000543881 PTGR1Q14914 329 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 CD226Q15762 336 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 CTU2Q2VPK5 515 aaKnown RBP10.62□□□□□ -0.71
GABPB1-206ENST00000543881 PLPPR5Q32ZL2 321 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 C6orf136Q5SQH8 315 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 HEPHL1Q6MZM0 1159 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 ZCCHC12Q6PEW1 402 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 PODNL1Q6PEZ8 512 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 MTERF4Q7Z6M4 381 aaKnown RBP10.62□□□□□ -0.71
GABPB1-206ENST00000543881 GTPBP8Q8N3Z3 284 aaPredicted RBP10.62□□□□□ -0.71
GABPB1-206ENST00000543881 POC1BQ8TC44 478 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 IGFBPL1Q8WX77 278 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 ZC3HAV1LQ96H79 300 aaKnown RBP10.62□□□□□ -0.71
GABPB1-206ENST00000543881 SH3YL1Q96HL8 342 aaPredicted RBP10.62□□□□□ -0.71
GABPB1-206ENST00000543881 ADGRG7Q96K78 797 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 PPP3R2Q96LZ3 170 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 C1orf50Q9BV19 199 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 EML4Q9HC35 981 aaKnown RBP10.62□□□□□ -0.71
GABPB1-206ENST00000543881 ZCCHC3Q9NUD5 404 aaKnown RBP10.62□□□□□ -0.71
GABPB1-206ENST00000543881 MED17Q9NVC6 651 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 USF3Q68DE3 2245 aa10.62□□□□□ -0.71
GABPB1-206ENST00000543881 EIF1AYO14602 144 aaKnown RBP10.61□□□□□ -0.71
GABPB1-206ENST00000543881 OIP5O43482 229 aa10.61□□□□□ -0.71
GABPB1-206ENST00000543881 IFNA2P01563 188 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 179.8 ms