RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 POU5F2Q8N7G0 328 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 CCDC197Q8NCU1 140 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 TOR1AIP2Q8NFQ8 470 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 RCN3Q96D15 328 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 TMEM19Q96HH6 336 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 SPATA9Q9BWV2 254 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 DEFB127Q9H1M4 99 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 RUBCNLQ9H714 662 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 KAT8Q9H7Z6 458 aaKnown RBP17.68■□□□□ 0.42
DDX55-207ENST00000540763 MTHFD2LQ9H903 347 aaPredicted RBP17.68■□□□□ 0.42
DDX55-207ENST00000540763 BCL2L10Q9HD36 194 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 KCNE5Q9UJ90 142 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 FBXL2Q9UKC9 423 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 SLC35A3Q9Y2D2 325 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 ZNF835Q9Y2P0 537 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 PRRC2CQ9Y520 2896 aaKnown RBP17.68■□□□□ 0.42
DDX55-207ENST00000540763 TRGV5A0A0B4J1U4 118 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 A0A0G2JPF8 293 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 SERINC4A6NH21 518 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 AGAP5A6NIR3 686 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 HNRNPCL2B2RXH8 293 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 B4DXG7 233 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 HNRNPCL3B7ZW38 293 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 CDC40O60508 579 aaKnown RBP eCLIP17.67■□□□□ 0.42
DDX55-207ENST00000540763 EIF4E2O60573 245 aaKnown RBP17.67■□□□□ 0.42
DDX55-207ENST00000540763 HNRNPCL1O60812 293 aaKnown RBP17.67■□□□□ 0.42
DDX55-207ENST00000540763 WISP2O76076 250 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 CELA3AP09093 270 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 HNRNPCL4P0DMR1 293 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 SRSF1Q07955 248 aaKnown RBP eCLIP17.67■□□□□ 0.429e-9■■■□□ 17
DDX55-207ENST00000540763 RBBP4Q09028 425 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 MRPL49Q13405 166 aaKnown RBP17.67■□□□□ 0.42
DDX55-207ENST00000540763 GLYR1Q49A26 553 aaPredicted RBP17.67■□□□□ 0.42
DDX55-207ENST00000540763 NHSL2Q5HYW2 709 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 NANOGP8Q6NSW7 305 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 NET1Q7Z628 596 aaPredicted RBP17.67■□□□□ 0.42
DDX55-207ENST00000540763 SERPINA11Q86U17 422 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 CHERPQ8IWX8 916 aaKnown RBP17.67■□□□□ 0.42
DDX55-207ENST00000540763 FAM83FQ8NEG4 500 aaPredicted RBP17.67■□□□□ 0.42
DDX55-207ENST00000540763 BBS10Q8TAM1 723 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 NEIL3Q8TAT5 605 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 PHOSPHO1Q8TCT1 267 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 TREX2Q9BQ50 279 aaPredicted RBP17.67■□□□□ 0.42
DDX55-207ENST00000540763 THUMPD3Q9BV44 507 aaKnown RBP17.67■□□□□ 0.42
DDX55-207ENST00000540763 DSN1Q9H410 356 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 LDAHQ9H6V9 325 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 NANOGQ9H9S0 305 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 EFCAB1Q9HAE3 211 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 DKKL1Q9UK85 242 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 AP3M1Q9Y2T2 418 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 L3MBTL1Q9Y468 752 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 LIPGQ9Y5X9 500 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 HEATR5AQ86XA9 2040 aa17.67■□□□□ 0.42
DDX55-207ENST00000540763 A0A1B0GTH9 108 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 TRAPPC6AO75865 159 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 DBIP07108 87 aaKnown RBP17.66■□□□□ 0.42
DDX55-207ENST00000540763 NUDT7P0C024 238 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 UBL4AP11441 157 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 GNLYP22749 145 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 DPP4P27487 766 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 MTPNP58546 118 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 CAPRIN1Q14444 709 aaKnown RBP17.66■□□□□ 0.42
DDX55-207ENST00000540763 OR5M10Q6IEU7 315 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 SLC30A8Q8IWU4 369 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 PEX5LQ8IYB4 626 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 C10orf111Q8N326 155 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 ZNF614Q8N883 585 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 GATSQ8NAP1 163 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 B4GALNT2Q8NHY0 566 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 SARAFQ96BY9 339 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 C1GALT1C1Q96EU7 318 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.66■□□□□ 0.42
DDX55-207ENST00000540763 MED11Q9P086 117 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 COL12A1Q99715 3063 aa17.66■□□□□ 0.42
DDX55-207ENST00000540763 POLEQ07864 2286 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 A0A087WZY1 265 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 CENPVL1A0A0U1RR11 272 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 C5orf58C9J3I9 102 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 NDUFAB1O14561 156 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 BCKDKO14874 412 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 ZNF264O43296 627 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 SLC19A2O60779 497 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 CSTAP01040 98 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 THBS1P07996 1170 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 STSP08842 583 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 ETS2P15036 469 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 PTGS2P35354 604 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 GCKP35557 465 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 UQCRFS1P47985 274 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 P2RX1P51575 399 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 CDK6Q00534 326 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 ZNF117Q03924 483 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 TOMM20Q15388 145 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 MAPK14Q16539 360 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 ZSWIM7Q19AV6 140 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 REEP3Q6NUK4 255 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 EIF3MQ7L2H7 374 aaKnown RBP17.65■□□□□ 0.42
DDX55-207ENST00000540763 OLIG3Q7RTU3 272 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 SPPL2CQ8IUH8 684 aa17.65■□□□□ 0.42
DDX55-207ENST00000540763 C11orf65Q8NCR3 313 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms