RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 ZNF415Q09FC8 603 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 ASPHQ12797 758 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 KLF9Q13886 244 aaPredicted RBP5.39□□□□□ -1.55
MRE11-209ENST00000540013 GPNMBQ14956 572 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 TWIST1Q15672 202 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 PHKG1Q16816 387 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 LIPNQ5VXI9 398 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 OR4A47Q6IF82 309 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 TRIM65Q6PJ69 517 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 TRMT10CQ7L0Y3 403 aaKnown RBP5.39□□□□□ -1.55
MRE11-209ENST00000540013 DPY19L4Q7Z388 723 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 PARGQ86W56 976 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 FBXL16Q8N461 479 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 OR2AK2Q8NG84 335 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 WDR36Q8NI36 951 aaKnown RBP5.39□□□□□ -1.55
MRE11-209ENST00000540013 HMGCLL1Q8TB92 370 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 TMEM163Q8TC26 289 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 PHOSPHO2Q8TCD6 241 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 RNF128Q8TEB7 428 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 TMEM37Q8WXS4 190 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 SH3YL1Q96HL8 342 aaPredicted RBP5.39□□□□□ -1.55
MRE11-209ENST00000540013 AKR1E2Q96JD6 320 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 PANK2Q9BZ23 570 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 SPRY4Q9C004 299 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 VN1R1Q9GZP7 353 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 OR52A5Q9H2C5 316 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 DHX33Q9H6R0 707 aaKnown RBP5.39□□□□□ -1.55
MRE11-209ENST00000540013 SMYD3Q9H7B4 428 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 UBTD1Q9HAC8 227 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 LPAR2Q9HBW0 351 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 SDHAF3Q9NRP4 125 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 PNO1Q9NRX1 252 aaKnown RBP5.39□□□□□ -1.55
MRE11-209ENST00000540013 POT1Q9NUX5 634 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 MIOXQ9UGB7 285 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 MRTO4Q9UKD2 239 aaKnown RBP5.39□□□□□ -1.55
MRE11-209ENST00000540013 UTS2RQ9UKP6 389 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 VANGL2Q9ULK5 521 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 GSTK1Q9Y2Q3 226 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 NSG2Q9Y328 171 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 CBY1Q9Y3M2 126 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 ATP6V1DQ9Y5K8 247 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 RALGAPA2Q2PPJ7 1873 aa5.39□□□□□ -1.55
MRE11-209ENST00000540013 COL4A4P53420 1690 aaPredicted RBP5.38□□□□□ -1.55
MRE11-209ENST00000540013 GSTTP1A0A1W2PQM5 241 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 A8MU76 341 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 TULP2O00295 520 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 NR5A2O00482 541 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 ARPC2O15144 300 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 TPST2O60704 377 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 KCNJ13O60928 360 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 H6PDO95479 791 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 CLPTM1O96005 669 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 CST1P01037 141 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 CD59P13987 128 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 ACKR3P25106 362 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 GJB2P29033 226 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 CSTF2P33240 577 aaKnown RBP eCLIP5.38□□□□□ -1.55
MRE11-209ENST00000540013 NPY2RP49146 381 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 MYL6P60660 151 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 GPR176Q14439 515 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 RBMS2Q15434 407 aaKnown RBP5.38□□□□□ -1.55
MRE11-209ENST00000540013 EFNB3Q15768 340 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 ETFDHQ16134 617 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 MICBQ29980 383 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 ACSF3Q4G176 576 aaPredicted RBP5.38□□□□□ -1.55
MRE11-209ENST00000540013 ZNF542PQ5EBM4 170 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 BEX5Q5H9J7 111 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 OR2A2Q6IF42 318 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 CAPRIN2Q6IMN6 1127 aaKnown RBP5.38□□□□□ -1.55
MRE11-209ENST00000540013 ZNF425Q6IV72 752 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 C11orf87Q6NUJ2 197 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 KCNIP4Q6PIL6 250 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 CEACAM20Q6UY09 585 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 TRMT1LQ7Z2T5 733 aaKnown RBP5.38□□□□□ -1.55
MRE11-209ENST00000540013 LGI2Q8N0V4 545 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 CPSF7Q8N684 471 aaKnown RBP5.38□□□□□ -1.55
MRE11-209ENST00000540013 OR1L4Q8NGR5 311 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 SCARB1Q8WTV0 552 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 SCFD1Q8WVM8 642 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 MAIP1Q8WWC4 291 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 ASB5Q8WWX0 329 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 FAM3CQ92520 227 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 SEMA4DQ92854 862 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 RBM41Q96IZ5 413 aaKnown RBP5.38□□□□□ -1.55
MRE11-209ENST00000540013 MAP3K3Q99759 626 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 TMEM175Q9BSA9 504 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 C20orf24Q9BUV8 137 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 MTHFD2LQ9H903 347 aaPredicted RBP5.38□□□□□ -1.55
MRE11-209ENST00000540013 SLC52A3Q9NQ40 469 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 C20orf96Q9NUD7 363 aaPredicted RBP5.38□□□□□ -1.55
MRE11-209ENST00000540013 MTCH1Q9NZJ7 389 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 STOX2Q9P2F5 926 aaPredicted RBP5.38□□□□□ -1.55
MRE11-209ENST00000540013 LCMT1Q9UIC8 334 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 TINAGQ9UJW2 476 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 DIMT1Q9UNQ2 313 aaKnown RBP5.38□□□□□ -1.55
MRE11-209ENST00000540013 YIPF1Q9Y548 306 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 NFASCO94856 1347 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 NRCAMQ92823 1304 aa5.38□□□□□ -1.55
MRE11-209ENST00000540013 REV3LO60673 3130 aa5.37□□□□□ -1.55
MRE11-209ENST00000540013 ATG2AQ2TAZ0 1938 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms