RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 ZFP28Q8NHY6 868 aa12.65□□□□□ -0.38
CCND1-204ENST00000539241 COQ8BQ96D53 544 aa12.65□□□□□ -0.38
CCND1-204ENST00000539241 ZBED6CLQ96FA7 236 aaPredicted RBP12.65□□□□□ -0.38
CCND1-204ENST00000539241 ZBTB18Q99592 522 aa12.65□□□□□ -0.38
CCND1-204ENST00000539241 BHLHE41Q9C0J9 482 aaPredicted RBP12.65□□□□□ -0.38
CCND1-204ENST00000539241 DLL4Q9NR61 685 aa12.65□□□□□ -0.38
CCND1-204ENST00000539241 PPP4R1LQ9P1A2 415 aa12.65□□□□□ -0.38
CCND1-204ENST00000539241 PACSIN3Q9UKS6 424 aa12.65□□□□□ -0.38
CCND1-204ENST00000539241 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 A0A1W2PNV4 684 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 A8MXE2 369 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 SCO2O43819 266 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 TNFSF13O75888 250 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 SLITRK5O94991 958 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 TGM6O95932 706 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 LAMP1P11279 417 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 MC3RP41968 323 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 FRKP42685 505 aaPredicted RBP12.64□□□□□ -0.39
CCND1-204ENST00000539241 NCBP2P52298 156 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCND1-204ENST00000539241 NME5P56597 212 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 B3GALT5-AS1P59052 145 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 PSG6Q00889 435 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 SQLEQ14534 574 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 BCL2A1Q16548 175 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 CHMP1BQ7LBR1 199 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 SPATA21Q7Z572 469 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 CPLX4Q7Z7G2 160 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 FADS6Q8N9I5 356 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 OR8J2Q8NGG1 315 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 C10orf82Q8WW14 230 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 CIDECQ96AQ7 238 aaPredicted RBP12.64□□□□□ -0.39
CCND1-204ENST00000539241 TEX37Q96LM6 180 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 AMDHD1Q96NU7 426 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 DUSP26Q9BV47 211 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 FAM107BQ9H098 131 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 DSN1Q9H410 356 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 ACSS1Q9NUB1 689 aaPredicted RBP12.64□□□□□ -0.39
CCND1-204ENST00000539241 DOCK7Q96N67 2140 aa12.64□□□□□ -0.39
CCND1-204ENST00000539241 A0A087WV62 115 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 A0A1W2PPR1 153 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 MSTNO14793 375 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 CASKO14936 926 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 SHOX2O60902 331 aaPredicted RBP12.63□□□□□ -0.39
CCND1-204ENST00000539241 SLC22A3O75751 556 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 CRHP06850 196 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 IFI6P09912 130 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 PEPDP12955 493 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 FOSL1P15407 271 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 HK1P19367 917 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 CPOXP36551 454 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 SF3A3Q12874 501 aaKnown RBP eCLIP12.63□□□□□ -0.394e-8■■■□□ 16.5
CCND1-204ENST00000539241 MLC1Q15049 377 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 FAM174BQ3ZCQ3 159 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 CYP27C1Q4G0S4 372 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 SPANXN4Q5MJ08 99 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 RAET1LQ5VY80 246 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 TMEM107Q6UX40 140 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 UBQLNLQ8IYU4 475 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 MEIOBQ8N635 442 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 WFDC11Q8NEX6 87 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 OR2M3Q8NG83 312 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 NUDT8Q8WV74 236 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 SMPDL3BQ92485 455 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 ELAC2Q9BQ52 826 aaKnown RBP12.63□□□□□ -0.39
CCND1-204ENST00000539241 GLIPR2Q9H4G4 154 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 GSX1Q9H4S2 264 aaPredicted RBP12.63□□□□□ -0.39
CCND1-204ENST00000539241 ZNF385DQ9H6B1 395 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 MRGBPQ9NV56 204 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 DDX18Q9NVP1 670 aaKnown RBP12.63□□□□□ -0.39
CCND1-204ENST00000539241 TMEM45AQ9NWC5 275 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 NDRG3Q9UGV2 375 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 ADAM21Q9UKJ8 722 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 ABCG2Q9UNQ0 655 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 C19orf53Q9UNZ5 99 aaPredicted RBP12.63□□□□□ -0.39
CCND1-204ENST00000539241 TESMINQ9Y4I5 508 aa12.63□□□□□ -0.39
CCND1-204ENST00000539241 NAV3Q8IVL0 2385 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 SLC22A20A6NK97 555 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 UPK1AO00322 258 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 FADS1O60427 444 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 SNX3O60493 162 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 SMNDC1O75940 238 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCND1-204ENST00000539241 HOXB4P17483 251 aaPredicted RBP12.62□□□□□ -0.39
CCND1-204ENST00000539241 CD53P19397 219 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 NCF2P19878 526 aaPredicted RBP12.62□□□□□ -0.39
CCND1-204ENST00000539241 IL12AP29459 219 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 S100A3P33764 101 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 MANFP55145 182 aaKnown RBP12.62□□□□□ -0.39
CCND1-204ENST00000539241 STX5Q13190 355 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 GANABQ14697 944 aaKnown RBP12.62□□□□□ -0.39
CCND1-204ENST00000539241 DECR1Q16698 335 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 PGS1Q32NB8 556 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 OR2A2Q6IF42 318 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 VWA1Q6PCB0 445 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 CNEP1R1Q8N9A8 125 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 OR9I1Q8NGQ6 314 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 STARD4Q96DR4 205 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 RABEP2Q9H5N1 569 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 NEUROD4Q9HD90 331 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 Q9N2J8 555 aa12.62□□□□□ -0.39
CCND1-204ENST00000539241 SDHAF3Q9NRP4 125 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms