RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 IL12AP29459 219 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 UQCRC1P31930 480 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 ASCL1P50553 236 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 RNF144AP50876 292 aaPredicted RBP11.64□□□□□ -0.55
HDAC1-209ENST00000484305 CLNS1AP54105 237 aaKnown RBP11.64□□□□□ -0.55
HDAC1-209ENST00000484305 CASP9P55211 416 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 CLDN20P56880 219 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 FAM174BQ3ZCQ3 159 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 ANXA8L1Q5VT79 327 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 BHLHB9Q6PI77 547 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 SPATA19Q7Z5L4 167 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 GCNT2Q8N0V5 402 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 INTS12Q96CB8 462 aaKnown RBP11.64□□□□□ -0.55
HDAC1-209ENST00000484305 SH3YL1Q96HL8 342 aaPredicted RBP11.64□□□□□ -0.55
HDAC1-209ENST00000484305 TM9SF2Q99805 663 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 MCCC2Q9HCC0 563 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 PCDHGB4Q9UN71 923 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 L3MBTL1Q9Y468 752 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 GPR45Q9Y5Y3 372 aa11.64□□□□□ -0.55
HDAC1-209ENST00000484305 MYO9AB2RTY4 2548 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 RNF103-CHMP3A0A140T963 221 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 E9PBE3 544 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 KLF11O14901 512 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 SEC14L5O43304 696 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 IL18BPO95998 194 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 UQCRC2P22695 453 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 S100A3P33764 101 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 OPRM1P35372 400 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 ZNF117Q03924 483 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 DPY19L1Q2PZI1 675 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 FBXL19-AS1Q494R0 122 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 FLYWCH1Q4VC44 716 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 SLC9B1Q4ZJI4 515 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 KLHL26Q53HC5 615 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.63□□□□□ -0.55
HDAC1-209ENST00000484305 OLIG3Q7RTU3 272 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 MAVSQ7Z434 540 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 GRAMD2AQ8IUY3 354 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 MISPQ8IVT2 679 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 MEIOBQ8N635 442 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 ZNF527Q8NB42 609 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 VPS37AQ8NEZ2 397 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 GOT1L1Q8NHS2 421 aaPredicted RBP11.63□□□□□ -0.55
HDAC1-209ENST00000484305 B4GALNT2Q8NHY0 566 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 PHOSPHO1Q8TCT1 267 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 ACTRT2Q8TDY3 377 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 ZNF75CPQ92670 426 aaPredicted RBP11.63□□□□□ -0.55
HDAC1-209ENST00000484305 RNASE6Q93091 150 aaKnown RBP11.63□□□□□ -0.55
HDAC1-209ENST00000484305 SLC35G5Q96KT7 338 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 ZFP3Q96NJ6 502 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 SDF2Q99470 211 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 HOXD1Q9GZZ0 328 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 OR51I1Q9H343 314 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 HHATLQ9HCP6 504 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 MED17Q9NVC6 651 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 JKAMPQ9P055 326 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 KCNN3Q9UGI6 736 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 AP4B1Q9Y6B7 739 aa11.63□□□□□ -0.55
HDAC1-209ENST00000484305 A0A087WZY1 265 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 SLC22A20A6NK97 555 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 EEF1E1-BLOC1S5C9J1V9 151 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 NPIPB9F8W1W9 429 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 SLCO1B7G3V0H7 640 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 ZNF195O14628 629 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 EEF1E1O43324 174 aaKnown RBP11.62□□□□□ -0.55
HDAC1-209ENST00000484305 OIP5O43482 229 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 C1QCP02747 245 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 PSMA4P25789 261 aaKnown RBP11.62□□□□□ -0.55
HDAC1-209ENST00000484305 ZNF41P51814 821 aaPredicted RBP11.62□□□□□ -0.55
HDAC1-209ENST00000484305 ATP12AP54707 1039 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 EEFSECP57772 596 aaKnown RBP11.62□□□□□ -0.55
HDAC1-209ENST00000484305 MYBPHQ13203 477 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 PLPPR5Q32ZL2 321 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 TTMPQ5BVD1 217 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 NXNQ6DKJ4 435 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 CBLN3Q6UW01 205 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 CHMP1BQ7LBR1 199 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 MTERF4Q7Z6M4 381 aaKnown RBP11.62□□□□□ -0.55
HDAC1-209ENST00000484305 GGNQ86UU5 652 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 GTPBP8Q8N3Z3 284 aaPredicted RBP11.62□□□□□ -0.55
HDAC1-209ENST00000484305 CHDHQ8NE62 594 aaPredicted RBP11.62□□□□□ -0.55
HDAC1-209ENST00000484305 POC1BQ8TC44 478 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 PIWIL2Q8TC59 973 aaKnown RBP11.62□□□□□ -0.55
HDAC1-209ENST00000484305 MIPOL1Q8TD10 442 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 SMPDL3BQ92485 455 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 FIG4Q92562 907 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 ZNF845Q96IR2 970 aaPredicted RBP11.62□□□□□ -0.55
HDAC1-209ENST00000484305 MAELQ96JY0 434 aaKnown RBP11.62□□□□□ -0.55
HDAC1-209ENST00000484305 MARK4Q96L34 752 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 ATP6V1G3Q96LB4 118 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 CCDC115Q96NT0 180 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 ZNF559Q9BR84 538 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 SFXN3Q9BWM7 321 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 PINK1Q9BXM7 581 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 KCNE5Q9UJ90 142 aa11.62□□□□□ -0.55
HDAC1-209ENST00000484305 ANKHD1Q8IWZ3 2542 aaKnown RBP11.61□□□□□ -0.55
HDAC1-209ENST00000484305 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 DUXAA6NLW8 204 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 FCMRO60667 390 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 TNFRSF21O75509 655 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms