RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 FAM47E-STBD1D6RA91 191 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 HMGN4O00479 90 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 NR5A2O00482 541 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 KIAA0513O60268 411 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 ZIC3O60481 467 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 STX11O75558 287 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 ANP32DO95626 131 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 ZNF708P17019 499 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 ZNF17P17021 662 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 POU3F2P20265 443 aaPredicted RBP11.68□□□□□ -0.54
COL5A1-206ENST00000465877 HTR1EP28566 365 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 GRNP28799 593 aaKnown RBP11.68□□□□□ -0.54
COL5A1-206ENST00000465877 ADH7P40394 386 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 LHX2P50458 406 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 ATP4BP51164 291 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 ATP12AP54707 1039 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 CLDN18P56856 261 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 HPCAP84074 193 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 ZNF117Q03924 483 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 SQLEQ14534 574 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 C6orf10Q5SRN2 563 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 ATAD3BQ5T9A4 648 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 ARSKQ6UWY0 536 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 ZNF621Q6ZSS3 439 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 OLIG3Q7RTU3 272 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 MTERF4Q7Z6M4 381 aaKnown RBP11.68□□□□□ -0.54
COL5A1-206ENST00000465877 CCDC71Q8IV32 467 aaPredicted RBP11.68□□□□□ -0.54
COL5A1-206ENST00000465877 RFWD2Q8NHY2 731 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 PHOSPHO1Q8TCT1 267 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 ASB5Q8WWX0 329 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 ITCHQ96J02 903 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 SIKE1Q9BRV8 207 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 NMUR2Q9GZQ4 415 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 Q9UFV3 132 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 DCTN4Q9UJW0 460 aa11.68□□□□□ -0.54
COL5A1-206ENST00000465877 A0A0G2JND7 137 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 CENPVL1A0A0U1RR11 272 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 AHRRA9YTQ3 701 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 SHISA8B8ZZ34 492 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 H3BML4 177 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 HCRTR2O43614 444 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 CPN1P15169 458 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 MSX1P28360 303 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 ANXA11P50995 505 aaKnown RBP11.67□□□□□ -0.54
COL5A1-206ENST00000465877 ZNF41P51814 821 aaPredicted RBP11.67□□□□□ -0.54
COL5A1-206ENST00000465877 IRX1P78414 480 aaPredicted RBP11.67□□□□□ -0.54
COL5A1-206ENST00000465877 TXNL4AP83876 142 aaKnown RBP11.67□□□□□ -0.54
COL5A1-206ENST00000465877 SF3B4Q15427 424 aaKnown RBP eCLIP11.67□□□□□ -0.54
COL5A1-206ENST00000465877 GPR68Q15743 365 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 PLPPR5Q32ZL2 321 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 GTDC1Q4AE62 458 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 PDZK1Q5T2W1 519 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 RIPPLY2Q5TAB7 128 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 ZNF787Q6DD87 383 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 TYW3Q6IPR3 259 aaKnown RBP11.67□□□□□ -0.54
COL5A1-206ENST00000465877 SLC2A7Q6PXP3 512 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 FRRS1Q6ZNA5 592 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 SEM1Q6ZVN7 128 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 TMCO5AQ8N6Q1 288 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 NAXEQ8NCW5 288 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 OR5M1Q8NGP8 315 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 OR10Q1Q8NGQ4 319 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 B4GALNT2Q8NHY0 566 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 ZFP90Q8TF47 636 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 XAGE5Q8WWM1 108 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 ROPN1LQ96C74 230 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 TRIB1Q96RU8 372 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 TUBA1CQ9BQE3 449 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 PIGQQ9BRB3 760 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 CCDC167Q9P0B6 97 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 MKLN1Q9UL63 735 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 L3MBTL1Q9Y468 752 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 WDR45Q9Y484 360 aa11.67□□□□□ -0.54
COL5A1-206ENST00000465877 CSMD1Q96PZ7 3565 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 CSMD2Q7Z408 3487 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 A0A087WZY1 265 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 PRAMEF27A3QJZ7 478 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 MBD3L4A6NDZ8 208 aaPredicted RBP11.66□□□□□ -0.54
COL5A1-206ENST00000465877 MBD3L3A6NE82 208 aaPredicted RBP11.66□□□□□ -0.54
COL5A1-206ENST00000465877 MBD3L5A6NJ08 208 aaPredicted RBP11.66□□□□□ -0.54
COL5A1-206ENST00000465877 CD8B2A6NJW9 211 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 H3BNH8 94 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 SEC14L5O43304 696 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 OIP5O43482 229 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 FCMRO60667 390 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 UGT2B17O75795 530 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 TOXO94900 526 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 KRT75O95678 551 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 EPPINO95925 133 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 UBL4AP11441 157 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 HOXB9P17482 250 aaPredicted RBP11.66□□□□□ -0.54
COL5A1-206ENST00000465877 CAPN3P20807 821 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 STARP49675 285 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 SUMO3P55854 103 aaPredicted RBP11.66□□□□□ -0.54
COL5A1-206ENST00000465877 SRYQ05066 204 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 TMEM44Q2T9K0 475 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 NDUFAF6Q330K2 333 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 GLYR1Q49A26 553 aaPredicted RBP11.66□□□□□ -0.54
COL5A1-206ENST00000465877 GPAT3Q53EU6 434 aa11.66□□□□□ -0.54
COL5A1-206ENST00000465877 KLHL26Q53HC5 615 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms