RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 HEPHL1Q6MZM0 1159 aa9.74□□□□□ -0.85
LIN54-202ENST00000442461 OR4F15Q8NGB8 312 aa9.74□□□□□ -0.85
LIN54-202ENST00000442461 CXorf40BQ96DE9 158 aa9.74□□□□□ -0.85
LIN54-202ENST00000442461 UBXN10Q96LJ8 280 aa9.74□□□□□ -0.85
LIN54-202ENST00000442461 CNN2Q99439 309 aaKnown RBP9.74□□□□□ -0.85
LIN54-202ENST00000442461 TRMT61BQ9BVS5 477 aaKnown RBP9.74□□□□□ -0.85
LIN54-202ENST00000442461 OR11A1Q9GZK7 315 aa9.74□□□□□ -0.85
LIN54-202ENST00000442461 MINDY3Q9H8M7 445 aa9.74□□□□□ -0.85
LIN54-202ENST00000442461 CRLF2Q9HC73 371 aa9.74□□□□□ -0.85
LIN54-202ENST00000442461 NDUFB11Q9NX14 153 aa9.74□□□□□ -0.85
LIN54-202ENST00000442461 VNN3Q9NY84 501 aa9.74□□□□□ -0.85
LIN54-202ENST00000442461 NINQ8N4C6 2090 aa9.74□□□□□ -0.85
LIN54-202ENST00000442461 SDC1P18827 310 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 RNF144AP50876 292 aaPredicted RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 GPR143P51810 404 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 RABGGTBP53611 331 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 ZNF155Q12901 538 aaPredicted RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 TAF10Q12962 218 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 MFSD13AQ14CX5 517 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 UBE2NLQ5JXB2 153 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 HENMT1Q5T8I9 393 aaKnown RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 C6orf120Q7Z4R8 191 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 TMEM173Q86WV6 379 aaPredicted RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 NAXDQ8IW45 347 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 CERS5Q8N5B7 392 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 FRMD1Q8N878 549 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 TANKQ92844 425 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 FAM46AQ96IP4 442 aaKnown RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 RHNO1Q9BSD3 238 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 EDEM2Q9BV94 578 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 SUCNR1Q9BXA5 334 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 FN3KRPQ9HA64 309 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 BCO1Q9HAY6 547 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 DIP2BQ9P265 1576 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 PCDHGA2Q9Y5H1 932 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 CFAP20Q9Y6A4 193 aaKnown RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 A0A087X0M5 115 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 A0A1B0GX30 115 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 OR6C6A6NF89 314 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 LY86O95711 162 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 ZNF44P15621 663 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 POU3F3P20264 500 aaPredicted RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 C5AR1P21730 350 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 HOXD10P28358 340 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 GABRR2P28476 465 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 CALCRP30988 508 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 ZNF41P51814 821 aaPredicted RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 POLR2GP62487 172 aaKnown RBP eCLIP9.73□□□□□ -0.85
LIN54-202ENST00000442461 RAP1AP62834 184 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 ZXDBP98169 803 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 SP2Q02086 613 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 FAM74A1Q5RGS3 127 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 LPCAT3Q6P1A2 487 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 TMEM65Q6PI78 240 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 ZNF551Q7Z340 670 aaPredicted RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 ARHGAP12Q8IWW6 846 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 C9orf62Q8N4C0 152 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 IL17RCQ8NAC3 791 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 SMPDL3AQ92484 453 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 GIMAP5Q96F15 307 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 INTS14Q96SY0 518 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 NIPSNAP3BQ9BS92 247 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 C20orf24Q9BUV8 137 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 PTDSS2Q9BVG9 487 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 POLDIP3Q9BY77 421 aaKnown RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 TMEM231Q9H6L2 316 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 C1GALT1Q9NS00 363 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 ZNF226Q9NYT6 803 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 LSM5Q9Y4Y9 91 aaKnown RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 CNTRLQ7Z7A1 2325 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 A0A0G2JN53 185 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 RNF13O43567 381 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 PCDH8O95206 1070 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 RPLP2P05387 115 aaKnown RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 PTNP21246 168 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 TAGLN2P37802 199 aaKnown RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 EPHB3P54753 998 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 SHEQ5VZ18 495 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 NLGN4XQ8N0W4 816 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 CELF5Q8N6W0 485 aaKnown RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 OR10D4PQ8NGN7 298 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 APIPQ96GX9 242 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 TXN2Q99757 166 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 FAM83CQ9BQN1 747 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 PNO1Q9NRX1 252 aaKnown RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 CENPMQ9NSP4 180 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 TMEM14AQ9Y6G1 99 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 GNSP15586 552 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 IL1RNP18510 177 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 AK4P27144 223 aaPredicted RBP9.73□□□□□ -0.85
LIN54-202ENST00000442461 RAB1AP62820 205 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 OR5M10Q6IEU7 315 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 LCN10Q6JVE6 187 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 RHOUQ7L0Q8 258 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 PNPLA1Q8N8W4 532 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 BVESQ8NE79 360 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 SUN3Q8TAQ9 357 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 HAS2Q92819 552 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 FAM46BQ96A09 425 aa9.73□□□□□ -0.85
LIN54-202ENST00000442461 GPR78Q96P69 363 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms