RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 OR5M1Q8NGP8 315 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 LRRC8CQ8TDW0 803 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 OR52B2Q96RD2 323 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 HOXD1Q9GZZ0 328 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 CLCF1Q9UBD9 225 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 ZNF629Q9UEG4 869 aaPredicted RBP18.36■□□□□ 0.53
GTF3A-202ENST00000419181 ZNF337Q9Y3M9 751 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 USH1CQ9Y6N9 552 aa18.36■□□□□ 0.53
GTF3A-202ENST00000419181 MED12LQ86YW9 2145 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 NPIPA5A0A0B4J1W7 369 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 NPIPA7E9PJI5 369 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 DVL2O14641 736 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 AK1P00568 194 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 NPIPA8P0DM63 369 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 POU3F2P20265 443 aaPredicted RBP18.35■□□□□ 0.53
GTF3A-202ENST00000419181 BMP5P22003 454 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 ATP12AP54707 1039 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 FLYWCH1Q4VC44 716 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.35■□□□□ 0.53
GTF3A-202ENST00000419181 MTERF4Q7Z6M4 381 aaKnown RBP18.35■□□□□ 0.53
GTF3A-202ENST00000419181 ZNF527Q8NB42 609 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 WNT2BQ93097 391 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 NEURL3Q96EH8 262 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 MARK4Q96L34 752 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 SDF2Q99470 211 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 OR51I1Q9H343 314 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 SLCO1B3Q9NPD5 702 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 SDR39U1Q9NRG7 319 aaPredicted RBP18.35■□□□□ 0.53
GTF3A-202ENST00000419181 VDAC3Q9Y277 283 aa18.35■□□□□ 0.53
GTF3A-202ENST00000419181 A0A087WZY1 265 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 HCRTR2O43614 444 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 DIAPH2O60879 1101 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 ZNF17P17021 662 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 CLDN15P56746 228 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 LRRC74AQ0VAA2 488 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 GSTA3Q16772 222 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 HEPHL1Q6MZM0 1159 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 EPGNQ6UW88 154 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 PLXDC2Q6UX71 529 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 UBQLNLQ8IYU4 475 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 SH3YL1Q96HL8 342 aaPredicted RBP18.34■□□□□ 0.53
GTF3A-202ENST00000419181 ZFP3Q96NJ6 502 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 OR52E6Q96RD3 313 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 ZBTB18Q99592 522 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 TM9SF2Q99805 663 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 KLHDC3Q9BQ90 382 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 SLC35A5Q9BS91 424 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 NMUR2Q9GZQ4 415 aa18.34■□□□□ 0.53
GTF3A-202ENST00000419181 ANKHD1Q8IWZ3 2542 aaKnown RBP18.34■□□□□ 0.53
GTF3A-202ENST00000419181 C7orf72A4D263 438 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 SHISA8B8ZZ34 492 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 H3BML4 177 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 UBDO15205 165 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 SLC22A3O75751 556 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 SASH3O75995 380 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 CTSSP25774 331 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 SUCLG1P53597 346 aaKnown RBP18.33■□□□□ 0.52
GTF3A-202ENST00000419181 CASP9P55211 416 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 PPP2R2AP63151 447 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 ZNF117Q03924 483 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 PLPPR5Q32ZL2 321 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 ARHGAP11BQ3KRB8 267 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 DMRTC2Q8IXT2 367 aaPredicted RBP18.33■□□□□ 0.52
GTF3A-202ENST00000419181 GTPBP8Q8N3Z3 284 aaPredicted RBP18.33■□□□□ 0.52
GTF3A-202ENST00000419181 MEIOBQ8N635 442 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 B4GALNT2Q8NHY0 566 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 PHOSPHO1Q8TCT1 267 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 ZBTB8AQ96BR9 441 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 PANX1Q96RD7 426 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 INPP5KQ9BT40 448 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 ZNF350Q9GZX5 532 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 MED17Q9NVC6 651 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 EXD2Q9NVH0 621 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 ZIM2Q9NZV7 527 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 DTNAQ9Y4J8 743 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 AP4B1Q9Y6B7 739 aa18.33■□□□□ 0.52
GTF3A-202ENST00000419181 TACC2O95359 2948 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 H0YC42 278 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 H3BNH8 94 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 FCMRO60667 390 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 STX11O75558 287 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 RCBTB2O95199 551 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 TGDSO95455 350 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 AGR2O95994 175 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 IL18BPO95998 194 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 C1QCP02747 245 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 IL6P05231 212 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 TMIGD3P0DMS9 266 aaPredicted RBP18.32■□□□□ 0.52
GTF3A-202ENST00000419181 OR12D1P0DN82 309 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 PSMA4P25789 261 aaKnown RBP18.32■□□□□ 0.52
GTF3A-202ENST00000419181 CHI3L1P36222 383 aaPredicted RBP18.32■□□□□ 0.52
GTF3A-202ENST00000419181 CDKN2CP42773 168 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 ASCL1P50553 236 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 ZNF41P51814 821 aaPredicted RBP18.32■□□□□ 0.52
GTF3A-202ENST00000419181 TPD52P55327 224 aaPredicted RBP18.32■□□□□ 0.52
GTF3A-202ENST00000419181 DLX5P56178 289 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 CLDN20P56880 219 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 FBXL19-AS1Q494R0 122 aa18.32■□□□□ 0.52
GTF3A-202ENST00000419181 TNFAIP8L2Q6P589 184 aaPredicted RBP18.32■□□□□ 0.52
GTF3A-202ENST00000419181 CBLN3Q6UW01 205 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms