RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 IPCEF1Q8WWN9 437 aaPredicted RBP13.98□□□□□ -0.17
SCAF11-204ENST00000395454 MUL1Q969V5 352 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 FNDC11Q9BVV2 318 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 ADAP2Q9NPF8 381 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 FKBP14Q9NWM8 211 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 GPR55Q9Y2T6 319 aaPredicted RBP13.98□□□□□ -0.17
SCAF11-204ENST00000395454 XPNPEP2O43895 674 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 STX11O75558 287 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 OSMP13725 252 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 CHMP24386 653 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 ACVR2AP27037 513 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 FMO3P31513 532 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 CRISP1P54107 249 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 COX10Q12887 443 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 BIKQ13323 160 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 LSAMPQ13449 338 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 EIPR1Q53HC9 387 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 C1orf94Q6P1W5 598 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 PODNL1Q6PEZ8 512 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 FAM198BQ6UWH4 519 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 Q6ZPB1 254 aaPredicted RBP13.98□□□□□ -0.17
SCAF11-204ENST00000395454 OVCH1Q7RTY7 1134 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 GALNT12Q8IXK2 581 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 TOR1AIP2Q8NFQ8 470 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 OR1F2PQ96R84 312 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 UCK2Q9BZX2 261 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 POLR2J2Q9GZM3 115 aaKnown RBP13.98□□□□□ -0.17
SCAF11-204ENST00000395454 POLR2J3Q9H1A7 115 aaKnown RBP13.98□□□□□ -0.17
SCAF11-204ENST00000395454 KLHL28Q9NXS3 571 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 SCN3BQ9NY72 215 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.97□□□□□ -0.17
SCAF11-204ENST00000395454 CLDN4O14493 209 aa13.97□□□□□ -0.17
SCAF11-204ENST00000395454 ONECUT2O95948 504 aa13.97□□□□□ -0.17
SCAF11-204ENST00000395454 TP53P04637 393 aaPredicted RBP13.97□□□□□ -0.17
SCAF11-204ENST00000395454 DBIP07108 87 aaKnown RBP13.97□□□□□ -0.17
SCAF11-204ENST00000395454 ZGLP1P0C6A0 271 aa13.97□□□□□ -0.17
SCAF11-204ENST00000395454 STT3AP46977 705 aa13.97□□□□□ -0.17
SCAF11-204ENST00000395454 UGT2B15P54855 530 aa13.97□□□□□ -0.17
SCAF11-204ENST00000395454 LARS2Q15031 903 aaKnown RBP13.97□□□□□ -0.17
SCAF11-204ENST00000395454 NCF4Q15080 339 aa13.97□□□□□ -0.17
SCAF11-204ENST00000395454 PTGES3Q15185 160 aaKnown RBP13.97□□□□□ -0.17
SCAF11-204ENST00000395454 TGIF1Q15583 401 aa13.97□□□□□ -0.17
SCAF11-204ENST00000395454 TBC1D25Q3MII6 688 aa13.97□□□□□ -0.17
SCAF11-204ENST00000395454 MRPL14Q6P1L8 145 aaKnown RBP13.97□□□□□ -0.17
SCAF11-204ENST00000395454 ZFAND2BQ8WV99 257 aa13.97□□□□□ -0.17
SCAF11-204ENST00000395454 UBE2FQ969M7 185 aa13.97□□□□□ -0.17
SCAF11-204ENST00000395454 GTPBP3Q969Y2 492 aaKnown RBP13.97□□□□□ -0.17
SCAF11-204ENST00000395454 ISOC1Q96CN7 298 aa13.97□□□□□ -0.17
SCAF11-204ENST00000395454 NMD3Q96D46 503 aaKnown RBP13.97□□□□□ -0.17
SCAF11-204ENST00000395454 EVA1AQ9H8M9 152 aa13.97□□□□□ -0.17
SCAF11-204ENST00000395454 PRTFDC1Q9NRG1 225 aa13.97□□□□□ -0.17
SCAF11-204ENST00000395454 ZNF226Q9NYT6 803 aa13.97□□□□□ -0.17
SCAF11-204ENST00000395454 MKLN1Q9UL63 735 aa13.97□□□□□ -0.17
SCAF11-204ENST00000395454 IGLV3-12A0A075B6K2 115 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 OR2W5A6NFC9 320 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 OR10H2O60403 315 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 MPZL2O60487 215 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 LIPCP11150 499 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 NID1P14543 1247 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 STAT5AP42229 794 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 EMDP50402 254 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 MVKQ03426 396 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 FUT7Q11130 342 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 EXOSC7Q15024 291 aaKnown RBP13.96□□□□□ -0.17
SCAF11-204ENST00000395454 NEDD8Q15843 81 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 ENTPD8Q5MY95 495 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 FAM69BQ5VUD6 431 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 SLX4IPQ5VYV7 408 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 ZNF836Q6ZNA1 936 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 PRSS48Q7RTY5 328 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 HMGN2P46Q86SG4 172 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 LAPTM4BQ86VI4 370 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 DTX1Q86Y01 620 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 CCDC103Q8IW40 242 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 CLIP4Q8N3C7 705 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 COX18Q8N8Q8 333 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 OR4K5Q8NGD3 323 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 FAM81AQ8TBF8 368 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 CT55Q8WUE5 264 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 NKD1Q969G9 470 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 VSTM2LQ96N03 204 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 PELOQ9BRX2 385 aaKnown RBP13.96□□□□□ -0.17
SCAF11-204ENST00000395454 SLC26A1Q9H2B4 701 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 SLC13A4Q9UKG4 626 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 MKL2Q9ULH7 1088 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 ZNF232Q9UNY5 417 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 PCDHGA10Q9Y5H3 936 aa13.96□□□□□ -0.17
SCAF11-204ENST00000395454 OR10H3O60404 316 aa13.96□□□□□ -0.18
SCAF11-204ENST00000395454 CNOT3O75175 753 aaKnown RBP13.96□□□□□ -0.18
SCAF11-204ENST00000395454 CYP7B1O75881 506 aa13.96□□□□□ -0.18
SCAF11-204ENST00000395454 OR5F1O95221 314 aa13.96□□□□□ -0.18
SCAF11-204ENST00000395454 POU2F1P14859 743 aa13.96□□□□□ -0.18
SCAF11-204ENST00000395454 DLSTP36957 453 aa13.96□□□□□ -0.18
SCAF11-204ENST00000395454 ZNF136P52737 540 aa13.96□□□□□ -0.18
SCAF11-204ENST00000395454 PSG6Q00889 435 aa13.96□□□□□ -0.18
SCAF11-204ENST00000395454 SLC13A2Q13183 592 aa13.96□□□□□ -0.18
SCAF11-204ENST00000395454 SMN1Q16637 294 aaKnown RBP13.96□□□□□ -0.18
SCAF11-204ENST00000395454 OR52R1Q8NGF1 315 aa13.96□□□□□ -0.18
SCAF11-204ENST00000395454 RIT1Q92963 219 aa13.96□□□□□ -0.18
SCAF11-204ENST00000395454 TGIF2Q9GZN2 237 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms