RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 PCNX1Q96RV3 2341 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 LSM1O15116 133 aaKnown RBP5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 PLIN3O60664 434 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 PIAS1O75925 651 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 SYNGR4O95473 234 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 AGR2O95994 175 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 GBAP04062 536 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 CHN1P15882 459 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 AGFG1P52594 562 aaKnown RBP5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 DMTNQ08495 405 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 STK11Q15831 433 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 UGT3A2Q3SY77 523 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 SFRP5Q5T4F7 317 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 Q6ZT83 130 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 RIMKLAQ8IXN7 391 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 CMIPQ8IY22 773 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 ZNF527Q8NB42 609 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 ANKK1Q8NFD2 765 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 OR10H5Q8NGA6 315 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 TMEM171Q8WVE6 324 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 PROX1Q92786 737 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 TMEM45BQ96B21 275 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 RTN4RQ9BZR6 473 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 LGALS13Q9UHV8 139 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 ING1Q9UK53 422 aaPredicted RBP5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 PPP6CO00743 305 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 PMS2P2O95744 297 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 RAC3P60763 192 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 POU3F1Q03052 451 aaPredicted RBP5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 FAM27E3Q08E93 113 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 LRRC74AQ0VAA2 488 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 TIMM23BQ5SRD1 257 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 APOOLQ6UXV4 268 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 CEP112Q8N8E3 955 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 OR10D3Q8NH80 312 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 B4GALNT2Q8NHY0 566 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 Q96MF0 132 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 PINK1Q9BXM7 581 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 OPN3Q9H1Y3 402 aaPredicted RBP5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 SSU72Q9NP77 194 aaKnown RBP5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 OBP2BQ9NPH6 170 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 CRNNQ9UBG3 495 aaPredicted RBP5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 RNF115Q9Y4L5 304 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 EXOC1LA0A1B0GW35 172 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 PDLIM1O00151 329 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 ALOX5P09917 674 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 MYL2P10916 166 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 MRPS35P82673 323 aaKnown RBP5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 PON3Q15166 354 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 DESI1Q6ICB0 168 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 CCDC25Q86WR0 208 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 HIPK1Q86Z02 1210 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 OR4N2Q8NGD1 307 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 MAGEE2Q8TD90 523 aaPredicted RBP5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 GPR119Q8TDV5 335 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 HS3ST6Q96QI5 342 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 TMEM109Q9BVC6 243 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 ACTRT3Q9BYD9 372 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 TRIM2Q9C040 744 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 ESRP2Q9H6T0 727 aaKnown RBP5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 COQ10BQ9H8M1 238 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 DTNAQ9Y4J8 743 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 GMEB1Q9Y692 573 aa5.55□□□□□ -1.52
SMARCAD1-203ENST00000394961 SVILO95425 2214 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 ANKRD28O15084 1053 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 SCAMP2O15127 329 aaKnown RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 PRKD3O94806 890 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 SUPT7LO94864 414 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 YES1P07947 543 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 HOXB1P14653 301 aaPredicted RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 SDC1P18827 310 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 ADSLP30566 484 aaPredicted RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 CLDN20P56880 219 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 ZNF844Q08AG5 666 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 UBAP2Q5T6F2 1119 aaKnown RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 ZNF544Q6NX49 715 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 Q6ZSR9 355 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 IFT20Q8IY31 132 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 KAT2AQ92830 837 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 EXOSC8Q96B26 276 aaKnown RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 PIK3IP1Q96FE7 263 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 PPP3R2Q96LZ3 170 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 TBL1XR1Q9BZK7 514 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 EVA1AQ9H8M9 152 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 ACER3Q9NUN7 267 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 GPATCH2Q9NW75 528 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 FLRT3Q9NZU0 649 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 DMGDHQ9UI17 866 aaKnown RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 TRAPPC4Q9Y296 219 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 OR10H1Q9Y4A9 318 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 DSCAMO60469 2012 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 GNG14A0A1W2PPG7 69 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 SLC25A16P16260 332 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 PRKCAP17252 672 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 RPS4Y1P22090 263 aaKnown RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 SLC6A8P48029 635 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 MRPL19P49406 292 aaKnown RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 STARP49675 285 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms