RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 H1F0P07305 194 aaKnown RBP17.1■□□□□ 0.33
CLN3-206ENST00000360019 TBXA2RP21731 343 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 LCN1P31025 176 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 PNLIPRP2P54317 469 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 ENTPD8Q5MY95 495 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 FNDC7Q5VTL7 733 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 IGF2-ASQ6U949 168 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 OIT3Q8WWZ8 545 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 NACC2Q96BF6 587 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 MCHR1Q99705 422 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 RBM4BQ9BQ04 359 aaKnown RBP17.1■□□□□ 0.33
CLN3-206ENST00000360019 RBM4Q9BWF3 364 aaKnown RBP17.1■□□□□ 0.33
CLN3-206ENST00000360019 DEFB126Q9BYW3 111 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 FAM117AQ9C073 453 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 AP3D1O14617 1153 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 ACADSP16219 412 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 ELAVL4P26378 380 aaKnown RBP17.1■□□□□ 0.33
CLN3-206ENST00000360019 HTR2AP28223 471 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 CD226Q15762 336 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 RSPO4Q2I0M5 234 aaPredicted RBP17.1■□□□□ 0.33
CLN3-206ENST00000360019 NDUFAF6Q330K2 333 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 NHSL2Q5HYW2 709 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 CMIPQ8IY22 773 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 OFCC1Q8IZS5 231 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 TAGAPQ8N103 731 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 IL22RA1Q8N6P7 574 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 ZNF527Q8NB42 609 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 ALPK1Q96QP1 1244 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 ZBTB20Q9HC78 741 aaPredicted RBP17.1■□□□□ 0.33
CLN3-206ENST00000360019 IL17BQ9UHF5 180 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 TMEFF2Q9UIK5 374 aaPredicted RBP17.1■□□□□ 0.33
CLN3-206ENST00000360019 FBXL4Q9UKA2 621 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 PCDHGA6Q9Y5G7 932 aa17.1■□□□□ 0.33
CLN3-206ENST00000360019 A0A1W2PRQ8 180 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 OR6C70A6NIJ9 312 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 SCDO00767 359 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 PPM1BO75688 479 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 THY1P04216 161 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 UBTFL6P0CB48 400 aaPredicted RBP17.09■□□□□ 0.33
CLN3-206ENST00000360019 DAPP51397 102 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 TAS2R41P59536 307 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 CAMK2BQ13554 666 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 DGCR6Q14129 220 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 TGIF1Q15583 401 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 MICAQ29983 383 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 FGD3Q5JSP0 725 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 C6orf52Q5T4I8 152 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 MRGPREQ86SM8 312 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 GATSQ8NAP1 163 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 OR10G2Q8NGC3 310 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 ADAMTS16Q8TE57 1224 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 FUZQ9BT04 418 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 FNDC11Q9BVV2 318 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 RTN4RQ9BZR6 473 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 P4HTMQ9NXG6 502 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 SMPD3Q9NY59 655 aaPredicted RBP17.09■□□□□ 0.33
CLN3-206ENST00000360019 AP4B1Q9Y6B7 739 aa17.09■□□□□ 0.33
CLN3-206ENST00000360019 HS6ST1O60243 411 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 OR2J2O76002 312 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 SNAP29O95721 258 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 CSTAP01040 98 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 UQCRBP14927 111 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 HPGDP15428 266 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 ADH7P40394 386 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 HSPA13P48723 471 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 GK3PQ14409 553 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 SEC23BQ15437 767 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 ZSWIM7Q19AV6 140 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 FAHD1Q6P587 224 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 LYPD8Q6UX82 237 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 PLEKHM3Q6ZWE6 761 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 RANBP3LQ86VV4 465 aaPredicted RBP17.08■□□□□ 0.33
CLN3-206ENST00000360019 FAM71CQ8NEG0 241 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 OR9Q2Q8NGE9 314 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 SLC7A13Q8TCU3 470 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 GIPC3Q8TF64 312 aa17.08■□□□□ 0.33
CLN3-206ENST00000360019 TESQ9UGI8 421 aaKnown RBP17.08■□□□□ 0.33
CLN3-206ENST00000360019 EXPH5Q8NEV8 1989 aa17.08■□□□□ 0.32
CLN3-206ENST00000360019 DXOO77932 396 aaKnown RBP17.07■□□□□ 0.32
CLN3-206ENST00000360019 HPP00738 406 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 NGFRP08138 427 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 ACAA2P42765 397 aaKnown RBP17.07■□□□□ 0.32
CLN3-206ENST00000360019 FBXW4P57775 412 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 Q0VFX4 171 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 WLSQ5T9L3 541 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 KDM4DQ6B0I6 523 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 POGLUT1Q8NBL1 392 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 ADAMTS17Q8TE56 1095 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 OSBPL11Q9BXB4 747 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 EVA1AQ9H8M9 152 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 RAB26Q9ULW5 256 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 SLC35A3Q9Y2D2 325 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 SPTBN2O15020 2390 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 CFAP47Q6ZTR5 3102 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 DCDC2BA2VCK2 349 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 OIP5O43482 229 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 FADS1O60427 444 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 FMO6PO60774 539 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 OR5F1O95221 314 aa17.07■□□□□ 0.32
CLN3-206ENST00000360019 ITGAMP11215 1152 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms