RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 SSUH2Q9Y2M2 353 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 NR4A2P43354 598 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 OR52E8Q6IFG1 317 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 TMEM151AQ8N4L1 468 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 OR4A16Q8NH70 328 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 GFOD1Q9NXC2 390 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 TCRBV7S3A2A0A539 114 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 UNC119BA6NIH7 251 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 H7BY64 318 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 CCL5P13501 91 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 ATP6AP1Q15904 470 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 CTC1Q2NKJ3 1217 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 C6orf136Q5SQH8 315 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 NLRP8Q86W28 1048 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 ZFAND4Q86XD8 727 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 PRAP1Q96NZ9 151 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 TRIB1Q96RU8 372 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 PCDHGA1Q9Y5H4 931 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 MRC1P22897 1456 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 TDRD6O60522 2096 aaKnown RBP11.42□□□□□ -0.58
PCF11-201ENST00000298281 UBFD1O14562 309 aaKnown RBP11.42□□□□□ -0.58
PCF11-201ENST00000298281 FMO6PO60774 539 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 HTR1EP28566 365 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 IL2RGP31785 369 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 SLC11A1P49279 550 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 TAS2R30P59541 319 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 ZNF181Q2M3W8 571 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 TUSC1Q2TAM9 212 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 UGT3A2Q3SY77 523 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 C3orf49Q96BT1 292 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 CWH43Q9H720 699 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 SUSD5O60279 629 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 KDELR2P33947 212 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 LCN10Q6JVE6 187 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 HS3ST5Q8IZT8 346 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 PSMF1Q92530 271 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 OR4K3Q96R72 315 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 BOCQ9BWV1 1114 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 MINDY3Q9H8M7 445 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 AMY2AP04746 511 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 HOXA11P31270 313 aaPredicted RBP11.42□□□□□ -0.58
PCF11-201ENST00000298281 ETV4P43268 484 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 OR1E2P47887 323 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 SEC61A1P61619 476 aaKnown RBP11.42□□□□□ -0.58
PCF11-201ENST00000298281 MAP4K2Q12851 820 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 PCLAFQ15004 111 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 LIPKQ5VXJ0 399 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 MINDY1Q8N5J2 469 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 MS4A15Q8N5U1 240 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 UBL7Q96S82 380 aaPredicted RBP11.42□□□□□ -0.58
PCF11-201ENST00000298281 MFFQ9GZY8 342 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 SFXN1Q9H9B4 322 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 SLC2A6Q9UGQ3 507 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 HSPE1-MOB4S4R3N1 261 aa11.42□□□□□ -0.58
PCF11-201ENST00000298281 BIDP55957 195 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 ADARB1P78563 741 aaKnown RBP11.41□□□□□ -0.58
PCF11-201ENST00000298281 EVX2Q03828 476 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 UBE2NLQ5JXB2 153 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 PATZ1Q9HBE1 687 aaKnown RBP11.41□□□□□ -0.58
PCF11-201ENST00000298281 KIAA1456Q9P272 454 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 TMEM233B4DJY2 109 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 CDK1P06493 297 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 PABPC4LP0CB38 370 aaKnown RBP11.41□□□□□ -0.58
PCF11-201ENST00000298281 BCKDHBP21953 392 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 PRDX3P30048 256 aaKnown RBP11.41□□□□□ -0.58
PCF11-201ENST00000298281 MRPS34P82930 218 aaKnown RBP11.41□□□□□ -0.58
PCF11-201ENST00000298281 RAB33AQ14088 237 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 TIGD3Q6B0B8 471 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 NANOGP8Q6NSW7 305 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 TRNP1Q6NT89 227 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 GTF2H5Q6ZYL4 71 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 CCDC28AQ8IWP9 274 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 FAM109AQ8N4B1 249 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 OR2M7Q8NG81 312 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 TSACCQ96A04 125 aaPredicted RBP11.41□□□□□ -0.58
PCF11-201ENST00000298281 MAGIXQ9H6Y5 334 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 RNASEK-C17orf49H0YIS7 233 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 EIF3FO00303 357 aaPredicted RBP11.41□□□□□ -0.58
PCF11-201ENST00000298281 PRICKLE3O43900 615 aaPredicted RBP11.41□□□□□ -0.58
PCF11-201ENST00000298281 VIPR2P41587 438 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 ZNF169Q14929 603 aaPredicted RBP11.41□□□□□ -0.58
PCF11-201ENST00000298281 Q6ZVL8 140 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 OR51A7Q8NH64 312 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 ST8SIA2Q92186 375 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 ARL11Q969Q4 196 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 PEX11GQ96HA9 241 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 LOC102725191A0A1B0GVB3 256 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 RFPL1O75677 317 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 ACTBP60709 375 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 ACTG1P63261 375 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 LEG1Q6P5S2 330 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 FAM58AQ8N1B3 248 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 LRRC18Q8N456 261 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 NECTIN4Q96NY8 510 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 S1PR3Q99500 378 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 OR10A5Q9H207 317 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 OR10A2Q9H208 303 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 OR6C65A6NJZ3 312 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 F6UZH7 168 aa11.41□□□□□ -0.58
PCF11-201ENST00000298281 TXNL1O43396 289 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms