RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Psmd7P26516 321 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Tacr1P30548 407 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Thbs1P35441 1170 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 AdmP97297 184 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Tmem181aQ3U3W2 474 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cdk5rap1Q8BTW8 588 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Timmdc1Q8BUY5 285 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Lpcat2Q8BYI6 544 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Nuak2Q8BZN4 639 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 MepceQ8K3A9 666 aaKnown RBP13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cd177Q8R2S8 817 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Fam20bQ8VCS3 409 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slc7a13Q91WN3 478 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Chrm5Q920H4 532 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Riok2Q9CQS5 547 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Adck1Q9D0L4 525 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Chp2Q9D869 196 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Lgi1Q9JIA1 557 aa13.77□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr1555-ps1A0A140LHT7 321 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 TmppeD3Z286 447 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Vmn2r110E9PWD5 858 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm10260F6YVP7 152 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 NsmafO35242 920 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 FiglaO55208 194 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Mtnd1P03888 318 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Apoa2P09813 102 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Defa-rs2P17534 91 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Fbxo40P62932 710 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Rit1P70426 219 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Kcnk2P97438 426 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Nell1Q2VWQ2 810 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Zfp933Q6PEE4 468 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Mettl2Q8BMK1 389 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Serinc2Q8K0E7 450 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Hemk1Q921L7 340 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Ucn3Q924A4 164 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Rbm18Q9CR83 190 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 PigkQ9CXY9 395 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cthrc1Q9D1D6 245 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Rhox2aQ9D4Y3 191 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Fundc2Q9D6K8 151 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Spin2-ps6A0A140T8V2 174 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm10406A6NAS4 205 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm3373A6NAS7 205 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm3298E9PW80 205 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm10799F7C7U2 104 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm3667K7N757 205 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Atp1b1P14094 304 aaKnown RBP13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cox5bP19536 128 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Pcmt1P23506 227 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm4951Q3UED7 406 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 D13Ertd608eQ3UPR8 151 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm3558Q5FWC9 205 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Spaca9Q7TPM5 168 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slitrk4Q810B8 837 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 TufmQ8BFR5 452 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Znf786Q8BV42 777 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Fbxw17Q8CFE8 466 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gpn2Q8VEJ1 310 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Pcdhac1Q91Y10 964 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Nudt21Q9CQF3 227 aaKnown RBP13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Nsa2Q9CR47 260 aaKnown RBP13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Zcchc12Q9CZA5 402 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Pbdc1Q9D0B6 198 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slc35a4Q9D321 324 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cdh20Q9Z0M3 801 aa13.76□□□□□ -0.21
Nup88-202ENSMUST00000108530 Sult2a7A0A1B0GRF0 313 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 4930451I11RikE9Q9R3 111 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 NgpO08692 167 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Zfp28P10078 825 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Prph2P15499 346 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gstm2P15626 218 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Emx1Q04742 257 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 CapslQ6P8Y1 208 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Ffar4Q7TMA4 361 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Dsg4Q7TMD7 1041 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Ankmy1Q8C0W1 906 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Casc3Q8K3W3 698 aaKnown RBP13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 RtbdnQ8QZY4 247 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slc5a2Q923I7 670 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slc19a3Q99PL8 488 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 ApmapQ9D7N9 415 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 EqtnQ9D9V2 337 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Raet1dQ9JI58 249 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 AgrnA2ASQ1 1950 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Iglc4A0A0G2JEK5 104 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Tbc1d25A1A5B6 742 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cisd3B1AR13 137 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 1700080E11RikE9Q9G1 206 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Omt2aF6ZJR3 104 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cldn34aG3UW52 211 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Vmn2r117K7N6V1 857 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Dscr3O35075 297 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Grk6O70293 576 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cd14P10810 366 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Foxa1P35582 468 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cd63P41731 238 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 TstP52196 297 aaKnown RBP13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Taf1aP97357 453 aa13.75□□□□□ -0.21
Nup88-202ENSMUST00000108530 Zfp41Q02526 198 aa13.75□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 133.4 ms