RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 CCKARP32238 428 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 GPC1P35052 558 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 MAP3K8P41279 467 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 EIF1P41567 113 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 EIF1AXP47813 144 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 SERPINB4P48594 390 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 TPD52P55327 224 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 PPP2R2BQ00005 443 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 ZYG11AQ6WRX3 759 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 GGNQ86UU5 652 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 C17orf53Q8N3J3 647 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 NOA1Q8NC60 698 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 KCNA7Q96RP8 456 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 RTN4RQ9BZR6 473 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 TIGARQ9NQ88 270 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 ACSS1Q9NUB1 689 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 ZNF701Q9NV72 531 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 RTTNQ86VV8 2226 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 TRIM64A6NGJ6 449 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 TRIM64BA6NI03 449 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 EIF1AYO14602 144 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 KLF4O43474 513 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 RGS14O43566 566 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 SEC22BO75396 215 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 AQP8O94778 261 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 PYGBP11216 843 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 PSMB1P20618 241 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 LOXP28300 417 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 RFX3P48380 749 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 PTH2RP49190 550 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 ZNF41P51814 821 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 KIAA0040Q15053 153 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 RNF165Q6ZSG1 346 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 FRMD7Q6ZUT3 714 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 ZNF550Q7Z398 422 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 ZNF611Q8N823 705 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 STEAP2Q8NFT2 490 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 OR5M1Q8NGP8 315 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 PPP1R14CQ8TAE6 165 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 FAM110BQ8TC76 370 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 PERPQ96FX8 193 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 ZC3HAV1LQ96H79 300 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 PPCSQ9HAB8 311 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 GP6Q9HCN6 339 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 NGBQ9NPG2 151 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 UBQLN4Q9NRR5 601 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 C1orf109Q9NX04 203 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 FLRT3Q9NZU0 649 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 TMED5Q9Y3A6 229 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 POLR3HQ9Y535 204 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 ROS1P08922 2347 aa15.97■□□□□ 0.15
SHKBP1-227ENST00000602011 A0A1W2PQD3 144 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 G3V2L1 256 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 UBFD1O14562 309 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 PDPK1O15530 556 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 CNOT4O95628 575 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 ADH6P28332 368 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 MANFP55145 182 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 FOXA1P55317 472 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 ETFDHQ16134 617 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 PRSS53Q2L4Q9 553 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 EXOC3L2Q2M3D2 409 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 GRAMD1BQ3KR37 738 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 APOOLQ6UXV4 268 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 STAC2Q6ZMT1 411 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 TRABD2AQ86V40 505 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 LRRN4CLQ8ND94 238 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 OR10D3Q8NH80 312 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 IGFBPL1Q8WX77 278 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 MTERF3Q96E29 417 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 REXO5Q96IC2 774 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 ADGRG7Q96K78 797 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 CCT7Q99832 543 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 REEP4Q9H6H4 257 aa15.96■□□□□ 0.15
SHKBP1-227ENST00000602011 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 C17orf51A8MQB3 221 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 INAFM1C9JVW0 142 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 GOLGA8RI6L899 631 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 OXSR1O95747 527 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 TUBBP07437 444 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 NEFHP12036 1026 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 RNPS1Q15287 305 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 ANKRD34AQ69YU3 496 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 ADAM5Q6NVV9 412 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 ZNF704Q6ZNC4 412 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 SSX8Q7RTT4 187 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 ZNF551Q7Z340 670 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 R3HCC1LQ7Z5L2 792 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 MTERF4Q7Z6M4 381 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 NATD1Q8N6N6 113 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 NUP43Q8NFH3 380 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 OR4C3Q8NH37 302 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 OR2V1Q8NHB1 315 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 PPCDCQ96CD2 204 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 C16orf45Q96MC5 204 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 HS3ST6Q96QI5 342 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 TMEM204Q9BSN7 226 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 TRMOQ9BU70 441 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 HOXD1Q9GZZ0 328 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms