RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ATG16L1Q676U5 607 aa15.15■□□□□ 0.02
USB1-211ENST00000565662 OR8J2Q8NGG1 315 aa15.15■□□□□ 0.02
USB1-211ENST00000565662 DUSP19Q8WTR2 217 aa15.15■□□□□ 0.02
USB1-211ENST00000565662 NINJ1Q92982 152 aa15.15■□□□□ 0.02
USB1-211ENST00000565662 ARL8AQ96BM9 186 aa15.15■□□□□ 0.02
USB1-211ENST00000565662 CHMP6Q96FZ7 201 aa15.15■□□□□ 0.02
USB1-211ENST00000565662 C1orf50Q9BV19 199 aa15.15■□□□□ 0.02
USB1-211ENST00000565662 KCNK9Q9NPC2 374 aa15.15■□□□□ 0.02
USB1-211ENST00000565662 JKAMPQ9P055 326 aa15.15■□□□□ 0.02
USB1-211ENST00000565662 PACSIN3Q9UKS6 424 aa15.15■□□□□ 0.02
USB1-211ENST00000565662 SNX8Q9Y5X2 465 aa15.15■□□□□ 0.02
USB1-211ENST00000565662 SLC22A20A6NK97 555 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 MSTNO14793 375 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 CFLARO15519 480 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 ELK4P28324 431 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 CPA2P48052 419 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 ANXA11P50995 505 aaKnown RBP15.14■□□□□ 0.01
USB1-211ENST00000565662 SRYQ05066 204 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 STX5Q13190 355 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 LASP1Q14847 261 aaKnown RBP15.14■□□□□ 0.01
USB1-211ENST00000565662 DUSP5Q16690 384 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 GRAMD1BQ3KR37 738 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 EXOSC6Q5RKV6 272 aaKnown RBP15.14■□□□□ 0.01
USB1-211ENST00000565662 LIX1LQ8IVB5 337 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 WDR75Q8IWA0 830 aaKnown RBP15.14■□□□□ 0.01
USB1-211ENST00000565662 RIMKLAQ8IXN7 391 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 SLC16A11Q8NCK7 471 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 NAXEQ8NCW5 288 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 OR7A2PQ8NGA2 310 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 PIK3R3Q92569 461 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 TESCQ96BS2 214 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 DPY30Q9C005 99 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 SIRT3Q9NTG7 399 aaPredicted RBP15.14■□□□□ 0.01
USB1-211ENST00000565662 NKIRAS1Q9NYS0 192 aa15.14■□□□□ 0.01
USB1-211ENST00000565662 OR2M5A3KFT3 312 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 TUBAL3A6NHL2 446 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 TRPC5OSA6NMA1 111 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 GJE1A6NN92 205 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 ACP2P11117 423 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 LAMP1P11279 417 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 CREB1P16220 341 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 LBPP18428 481 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 ADH6P28332 368 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 B3GALT5-AS1P59052 145 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 PDCD2Q16342 344 aaPredicted RBP15.13■□□□□ 0.01
USB1-211ENST00000565662 OR5M10Q6IEU7 315 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 OGFOD2Q6N063 350 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 MARCH3Q86UD3 253 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 GTPBP8Q8N3Z3 284 aaPredicted RBP15.13■□□□□ 0.01
USB1-211ENST00000565662 METTL25Q8N6Q8 603 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 TRIML2Q8N7C3 387 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 ZNF781Q8N8C0 355 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 C9orf106Q8NAJ2 232 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 TOR1AIP2Q8NFQ8 470 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 C3orf30Q96M34 536 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 GLRX2Q9NS18 164 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 EXD2Q9NVH0 621 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 THAP1Q9NVV9 213 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 MED11Q9P086 117 aa15.13■□□□□ 0.01
USB1-211ENST00000565662 RPH3AQ9Y2J0 694 aaPredicted RBP15.13■□□□□ 0.01
USB1-211ENST00000565662 LRBAP50851 2863 aa15.12■□□□□ 0.01
USB1-211ENST00000565662 UQCRHLA0A096LP55 91 aa15.12■□□□□ 0.01
USB1-211ENST00000565662 GXYLT2A0PJZ3 443 aa15.12■□□□□ 0.01
USB1-211ENST00000565662 GUSBP08236 651 aa15.12■□□□□ 0.01
USB1-211ENST00000565662 PABPC4LP0CB38 370 aaKnown RBP15.12■□□□□ 0.01
USB1-211ENST00000565662 G6PDP11413 515 aa15.12■□□□□ 0.01
USB1-211ENST00000565662 DCST2Q5T1A1 773 aa15.12■□□□□ 0.01
USB1-211ENST00000565662 ATAD3BQ5T9A4 648 aa15.12■□□□□ 0.01
USB1-211ENST00000565662 RBM24Q9BX46 236 aaKnown RBP15.12■□□□□ 0.01
USB1-211ENST00000565662 MEAF6Q9HAF1 191 aa15.12■□□□□ 0.01
USB1-211ENST00000565662 POLE3Q9NRF9 147 aa15.12■□□□□ 0.01
USB1-211ENST00000565662 NDRG3Q9UGV2 375 aa15.12■□□□□ 0.01
USB1-211ENST00000565662 MCTS1Q9ULC4 181 aaKnown RBP15.12■□□□□ 0.01
USB1-211ENST00000565662 ANKRD17O75179 2603 aaKnown RBP15.12■□□□□ 0.01
USB1-211ENST00000565662 WDR91A4D1P6 747 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 H3BML4 177 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 NME6O75414 186 aaPredicted RBP15.11■□□□□ 0.01
USB1-211ENST00000565662 C6orf47O95873 294 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 CD1EP15812 388 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 ARRB2P32121 409 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 SOAT1P35610 550 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 MAGEA8P43361 318 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 DAZAP2Q15038 168 aaPredicted RBP15.11■□□□□ 0.01
USB1-211ENST00000565662 SGCBQ16585 318 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 TMEM44Q2T9K0 475 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 GTF2IRD2BQ6EKJ0 949 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 FIGNL1Q6PIW4 674 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 POMZP3Q6PJE2 187 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 ESPNLQ6ZVH7 1005 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 SPATA19Q7Z5L4 167 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 GTF2IRD2Q86UP8 949 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 GLB1L3Q8NCI6 653 aaPredicted RBP15.11■□□□□ 0.01
USB1-211ENST00000565662 B4GALNT2Q8NHY0 566 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 DACH2Q96NX9 599 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 NMUR2Q9GZQ4 415 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 AKTIPQ9H8T0 292 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 TIGARQ9NQ88 270 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 PRDM4Q9UKN5 801 aa15.11■□□□□ 0.01
USB1-211ENST00000565662 GPC6Q9Y625 555 aaPredicted RBP15.11■□□□□ 0.01
USB1-211ENST00000565662 PRSS51A0A1B0GVH4 220 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms