RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-233	ENST00000557768	NDUFA9	Q16795	377 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	MEP1A	Q16819	746 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	KCTD19	Q17RG1	926 aa	Predicted RBP	5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	KLHL38	Q2WGJ6	581 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	FAM153C	Q494X1	144 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	ANKRD20A4	Q4UJ75	823 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	SFT2D3	Q587I9	215 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	ZNF628	Q5EBL2	1059 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	CES3	Q6UWW8	571 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	TBC1D26	Q86UD7	250 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	LRRC6	Q86X45	466 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	CHERP	Q8IWX8	916 aa	Known RBP	5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	CCDC170	Q8IYT3	715 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	KIF2B	Q8N4N8	673 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	CPSF7	Q8N684	471 aa	Known RBP	5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	LRRC57	Q8N9N7	239 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	FAM47B	Q8NA70	645 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	TMEM178A	Q8NBL3	297 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	ACBD4	Q8NC06	268 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	PHF10	Q8WUB8	498 aa	Known RBP	5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	SGCD	Q92629	289 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	TMCO6	Q96DC7	493 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	BIRC8	Q96P09	236 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	PAFAH2	Q99487	392 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	GPATCH1	Q9BRR8	931 aa	Known RBP	5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	CCDC106	Q9BWC9	280 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	UCK2	Q9BZX2	261 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	HRH4	Q9H3N8	390 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	TREX1	Q9NSU2	369 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	C19orf25	Q9UFG5	118 aa	Predicted RBP	5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	CARD8	Q9Y2G2	431 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	ANKHD1	Q8IWZ3	2542 aa	Known RBP	5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	HRNR	Q86YZ3	2850 aa	Predicted RBP	5	□□□□□ -1.61
HNRNPC-233	ENST00000557768	MPDZ	O75970	2070 aa		5	□□□□□ -1.61
HNRNPC-233	ENST00000557768		A0A0A0MQY5	61 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768		A0A1B0GTH9	108 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	FEZF1	A0PJY2	475 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	TRIM64	A6NGJ6	449 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	ZNF860	A6NHJ4	632 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	TRIM64B	A6NI03	449 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	FAM157A	C9JC47	383 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768		H0YIG0	161 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	TXNDC9	O14530	226 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	NDC80	O14777	642 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	ADAMDEC1	O15204	470 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	HCRTR2	O43614	444 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	NME2P1	O60361	137 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	CDC40	O60508	579 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	DNAJB6	O75190	326 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	PSIP1	O75475	530 aa	Known RBP	4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	CDC123	O75794	336 aa	Predicted RBP	4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	VAPB	O95292	243 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	SLC16A8	O95907	504 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	FTCD	O95954	541 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	CAT	P04040	527 aa	Known RBP	4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	F7	P08709	466 aa	Predicted RBP	4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	HOXB5	P09067	269 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	CCDC175	P0C221	793 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	ZSCAN5DP	P0CG00	497 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	ZNF24	P17028	368 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	RPS3	P23396	243 aa	Known RBP eCLIP	4.99	□□□□□ -1.61	2e-10	■■□□□ 12.3
HNRNPC-233	ENST00000557768	CYLC1	P35663	651 aa	Predicted RBP	4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	FDFT1	P37268	417 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	SOX2	P48431	317 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	NR0B1	P51843	470 aa	Known RBP	4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	HOXA4	Q00056	320 aa	Predicted RBP	4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	ACTN3	Q08043	901 aa	Predicted RBP	4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	ACSM2A	Q08AH3	577 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	PTK6	Q13882	451 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	KCNJ11	Q14654	390 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	ARHGAP19	Q14CB8	494 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	ABRAXAS2	Q15018	415 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	OASL	Q15646	514 aa	Known RBP	4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	NSDHL	Q15738	373 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	EXT1	Q16394	746 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	CCDC92	Q53HC0	331 aa	Predicted RBP	4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	ACSM2B	Q68CK6	577 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	SLC25A25	Q6KCM7	469 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	LRRC8E	Q6NSJ5	796 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	PAPD4	Q6PIY7	484 aa	Known RBP	4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	PEX26	Q7Z412	305 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	VN1R4	Q7Z5H5	301 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	CCDC91	Q7Z6B0	441 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	CCDC25	Q86WR0	208 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	MARVELD2	Q8N4S9	558 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	SLC5A8	Q8N695	610 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	HORMAD2	Q8N7B1	307 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	UBL4B	Q8N7F7	174 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	MCU	Q8NE86	351 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	OR5T3	Q8NGG3	340 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	M1AP	Q8TC57	530 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	DUSP19	Q8WTR2	217 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	TMEM170A	Q8WVE7	144 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	C1orf54	Q8WWF1	131 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	LPGAT1	Q92604	370 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	TSLP	Q969D9	159 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	TMEM68	Q96MH6	324 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	PRAP1	Q96NZ9	151 aa		4.99	□□□□□ -1.61
HNRNPC-233	ENST00000557768	EBNA1BP2	Q99848	306 aa	Known RBP	4.99	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms