RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 OR2A25A4D2G3 310 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 TLE3Q04726 772 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF543Q08ER8 600 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 GTF2H2Q13888 395 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 HLXQ14774 488 aaPredicted RBP8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 PRSS36Q5K4E3 855 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 GTF2H2CQ6P1K8 395 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 MON1BQ7L1V2 547 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 TECPR1Q7Z6L1 1165 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 MRPS24Q96EL2 167 aaKnown RBP8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 TPSD1Q9BZJ3 242 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 NOX3Q9HBY0 568 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 CHD4Q14839 1912 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 CELP19835 753 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 AGTR1P30556 359 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 ARHGAP19Q14CB8 494 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 TOMM20LQ6UXN7 152 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 WDR53Q7Z5U6 358 aaPredicted RBP8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 NRMQ8IXM6 262 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF548Q8NEK5 533 aaPredicted RBP8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 OR9K2Q8NGE7 335 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 OR56B1Q8NGI3 324 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 NUBPLQ8TB37 319 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 LINC01599Q8WXQ3 324 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 MRPS31Q92665 395 aaKnown RBP8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 P2RY11Q96G91 374 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 INTS14Q96SY0 518 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 TDRD3Q9H7E2 651 aaKnown RBP8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 MYO5CQ9NQX4 1742 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 MED17Q9NVC6 651 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 DDNO94850 711 aaPredicted RBP8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 IRF1P10914 325 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 IL2RBP14784 551 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 EPHA4P54764 986 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 RIPPLY1Q0D2K3 151 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 MAD2L1BPQ15013 274 aaPredicted RBP8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 AAK1Q2M2I8 961 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 TDRD10Q5VZ19 366 aaKnown RBP8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 ZC3H14Q6PJT7 736 aaKnown RBP8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 FTHL17Q9BXU8 183 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 SMIM3Q9BZL3 60 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 POPDC2Q9HBU9 364 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 MIEF1Q9NQG6 463 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 SNX10Q9Y5X0 201 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 TUBAL3A6NHL2 446 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 SOD2P04179 222 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 CNR1P21554 472 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 MC3RP41968 323 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 TFPI2P48307 235 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 CSNK1DP48730 415 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 RNF144AP50876 292 aaPredicted RBP8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 RAB28P51157 221 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 PCBP4P57723 403 aaKnown RBP8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 RAP2BP61225 183 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 PCBP2Q15366 365 aaKnown RBP eCLIP8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 EEF1DP3Q658K8 133 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 HSD17B13Q7Z5P4 300 aaPredicted RBP8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 LGI4Q8N135 537 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 TMEM161BQ8NDZ6 487 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 RCC1LQ96I51 464 aaKnown RBP8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 RNF170Q96K19 258 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 APOLD1Q96LR9 279 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 CLUHP3Q96NS8 147 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 CXXC1Q9P0U4 656 aaPredicted RBP8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 CSNK1G3Q9Y6M4 447 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 MYO18AQ92614 2054 aaKnown RBP8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 MLH3Q9UHC1 1453 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 KNDC1Q76NI1 1749 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 SEC14L6B5MCN3 397 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 GLSO94925 669 aaPredicted RBP8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 MPC2O95563 127 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 ALDOAP04075 364 aaKnown RBP8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 CYC1P08574 325 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 ADH6P28332 368 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 HOXC12P31275 282 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 F2RL1P55085 397 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 FXYD6P3P58550 94 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 TGM3Q08188 693 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 VEZF1Q14119 521 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 TREML2Q5T2D2 321 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 LCN8Q6JVE9 175 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 TMPRSS11FQ6ZWK6 438 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 TCEANCQ8N8B7 351 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 OR1S2Q8NGQ3 325 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 NSUN5Q96P11 429 aaKnown RBP8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 IL22Q9GZX6 179 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 E9PCH4 1651 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 GGT3PA6NGU5 568 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 SULT2B1O00204 365 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 DPM1O60762 260 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 HLA-DQA2P01906 255 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 H1F0P07305 194 aaKnown RBP8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 GGT2P36268 569 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 MRPL49Q13405 166 aaKnown RBP8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 OR7A5Q15622 319 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 MBOAT1Q6ZNC8 495 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 LANCL3Q6ZV70 420 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 ABHD12BQ7Z5M8 362 aaPredicted RBP8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 MAP4K3Q8IVH8 894 aa8.49□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF709Q8N972 641 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms