RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 RAET1LQ5VY80 246 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 ANKRD26P1Q6NSI1 321 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 EMBQ6PCB8 327 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 ZCCHC12Q6PEW1 402 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 MARCH3Q86UD3 253 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 GCNT2Q8N0V5 402 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 NUP43Q8NFH3 380 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 TCP10LQ8TDR4 215 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 CIDECQ96AQ7 238 aaPredicted RBP14.62□□□□□ -0.07
DDX55-212ENST00000544738 PPP3R2Q96LZ3 170 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 PIP5K1AQ99755 562 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 PIGQQ9BRB3 760 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 RBM24Q9BX46 236 aaKnown RBP14.62□□□□□ -0.07
DDX55-212ENST00000544738 SLC17A7Q9P2U7 560 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 STOML1Q9UBI4 398 aa14.62□□□□□ -0.07
DDX55-212ENST00000544738 EIF3LQ9Y262 564 aaKnown RBP14.62□□□□□ -0.07
DDX55-212ENST00000544738 PIP5K1BO14986 540 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 EMC8O43402 210 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 TNFRSF21O75509 655 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 ANGPTL1O95841 491 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 BCKDHAP12694 445 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 LCN1P31025 176 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 MLC1Q15049 377 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 ZNF385BQ569K4 471 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 SZRD1Q7Z422 152 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 P4HA3Q7Z4N8 544 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 UBQLNLQ8IYU4 475 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 OR6Y1Q8NGX8 325 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 CLHC1Q8NHS4 586 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 TMEM158Q8WZ71 300 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 PIK3R3Q92569 461 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 SLC9A6Q92581 669 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 C1GALT1C1Q96EU7 318 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 DACH2Q96NX9 599 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 MS4A4EQ96PG1 132 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 MECRQ9BV79 373 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 RTN4RQ9BZR6 473 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 FLRT3Q9NZU0 649 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 PACSIN3Q9UKS6 424 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 ZNF337Q9Y3M9 751 aa14.61□□□□□ -0.07
DDX55-212ENST00000544738 CHD3Q12873 2000 aaKnown RBP14.6□□□□□ -0.07
DDX55-212ENST00000544738 IGLV3-32A0A0A0MS00 114 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 GXYLT2A0PJZ3 443 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 OR2M5A3KFT3 312 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 SLC22A20A6NK97 555 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 C17orf51A8MQB3 221 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 TMEM233B4DJY2 109 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 SPAG7O75391 227 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 CNOT4O95628 575 aaKnown RBP14.6□□□□□ -0.07
DDX55-212ENST00000544738 HSPA4LO95757 839 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 NGFRP08138 427 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 HPCAL1P37235 193 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 OCRLQ01968 901 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.6□□□□□ -0.07
DDX55-212ENST00000544738 GRAMD1BQ3KR37 738 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 LUZP2Q86TE4 346 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 NATD1Q8N6N6 113 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 AENQ8WTP8 325 aaKnown RBP14.6□□□□□ -0.07
DDX55-212ENST00000544738 ATAD3AQ9NVI7 634 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 GALNT8Q9NY28 637 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 ATP6V1HQ9UI12 483 aa14.6□□□□□ -0.07
DDX55-212ENST00000544738 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 A0A1W2PNV4 684 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 SH3D21A4FU49 640 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 A8MXE2 369 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 ALG1L2C9J202 215 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 MSTNO14793 375 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 NDUFB5O43674 189 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 PEX11AO75192 247 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 LYPLA1O75608 230 aaPredicted RBP14.59□□□□□ -0.07
DDX55-212ENST00000544738 TNFSF13O75888 250 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 SOX30O94993 753 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 TGM6O95932 706 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 IFNA2P01563 188 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 IGKV1D-16P01601 117 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 ALOX5P09917 674 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 TBXA2RP21731 343 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 SERPINB4P48594 390 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 PCYT1AP49585 367 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 PRIM2P49643 509 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 RPS3AP61247 264 aaKnown RBP14.59□□□□□ -0.07
DDX55-212ENST00000544738 ATP6AP1LQ52LC2 224 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 XKR7Q5GH72 579 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 MFSD12Q6NUT3 480 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 WDR93Q6P2C0 686 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 PODNL1Q6PEZ8 512 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 PLXDC2Q6UX71 529 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 ZCCHC23Q6ZST2 131 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 EXOC3L1Q86VI1 746 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 SLC16A11Q8NCK7 471 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 OR4C3Q8NH37 302 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 FAM110BQ8TC76 370 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 AGR3Q8TD06 166 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 SMPDL3BQ92485 455 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 CAVIN3Q969G5 261 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 GIMAP5Q96F15 307 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 PRPF18Q99633 342 aaKnown RBP14.59□□□□□ -0.07
DDX55-212ENST00000544738 CCL19Q99731 98 aa14.59□□□□□ -0.07
DDX55-212ENST00000544738 TMEM109Q9BVC6 243 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms