RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 PRAMEF8Q5VWM4 474 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 PRAMEF7Q5VXH5 474 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 APOOLQ6UXV4 268 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 FRRS1Q6ZNA5 592 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 ZNF619Q8N2I2 560 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 METTL25Q8N6Q8 603 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 FADS6Q8N9I5 356 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 MRPS18CQ9Y3D5 142 aaKnown RBP17.72■□□□□ 0.43
DDX55-207ENST00000540763 GTF3C1Q12789 2109 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 A0A1B0GVC2 190 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 ANKUB1A6NFN9 424 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 H3BNH8 94 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 GNB5O14775 395 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 NDUFB5O43674 189 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 SUSD5O60279 629 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 TNFRSF21O75509 655 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 H6PDO95479 791 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 HPNP05981 417 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 NR2F1P10589 423 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 COX4I1P13073 169 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 CRISP3P54108 245 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 RBPJQ06330 500 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 ELOAQ14241 798 aaKnown RBP17.71■□□□□ 0.43
DDX55-207ENST00000540763 SLC10A1Q14973 349 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.71■□□□□ 0.43
DDX55-207ENST00000540763 GPAT3Q53EU6 434 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 FAM91A1Q658Y4 838 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 TYW3Q6IPR3 259 aaKnown RBP17.71■□□□□ 0.43
DDX55-207ENST00000540763 GFRALQ6UXV0 394 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 MARCH3Q86UD3 253 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 CMTM5Q96DZ9 223 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 GNRHR2Q96P88 292 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 RTN4RQ9BZR6 473 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 SLC38A1Q9H2H9 487 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 A4GALTQ9NPC4 353 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 GID8Q9NWU2 228 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 SUCOQ9UBS9 1254 aaKnown RBP17.71■□□□□ 0.43
DDX55-207ENST00000540763 DTNAQ9Y4J8 743 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 ZNF407Q9C0G0 2248 aa17.71■□□□□ 0.43
DDX55-207ENST00000540763 DSPPQ9NZW4 1301 aa17.71■□□□□ 0.42
DDX55-207ENST00000540763 DNAJC13O75165 2243 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 LOC100653049A0A140TA62 436 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 FXYD1O00168 92 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 FCMRO60667 390 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 KRT34O76011 436 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 TFPTP0C1Z6 253 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 MSX1P28360 303 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 SRD5A2P31213 254 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 ADH7P40394 386 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 GPR68Q15743 365 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 IGFBP7Q16270 282 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 SYPL1Q16563 259 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 ARHGAP11AQ6P4F7 1023 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 TREML1Q86YW5 311 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 OR8J3Q8NGG0 315 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 LRRC58Q96CX6 371 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 LRRC37BQ96QE4 947 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 SH3GL1Q99961 368 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 OR2B2Q9GZK3 357 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 TSPAN10Q9H1Z9 355 aaPredicted RBP17.7■□□□□ 0.42
DDX55-207ENST00000540763 IKZF5Q9H5V7 419 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 TMEM38AQ9H6F2 299 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 MKLN1Q9UL63 735 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 PCNX3Q9H6A9 2034 aa17.7■□□□□ 0.42
DDX55-207ENST00000540763 C2orf72A6NCS6 295 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 OR14I1A6ND48 311 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 UGT2B17O75795 530 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 BCHEP06276 602 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 CHRM4P08173 479 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 ARAFP10398 606 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 RPS4Y1P22090 263 aaKnown RBP17.69■□□□□ 0.42
DDX55-207ENST00000540763 MAPK11Q15759 364 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 ZNF630Q2M218 657 aaPredicted RBP17.69■□□□□ 0.42
DDX55-207ENST00000540763 GCNT6Q5T4J0 391 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 TRILQ7L0X0 811 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 ANKFN1Q8N957 763 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 OR2M3Q8NG83 312 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 OR4K17Q8NGC6 315 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 DUSP19Q8WTR2 217 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 SLC38A5Q8WUX1 472 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 PTGES2Q9H7Z7 377 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 HRH3Q9Y5N1 445 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 FLNCQ14315 2725 aa17.69■□□□□ 0.42
DDX55-207ENST00000540763 LRRK2Q5S007 2527 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 ESPL1Q14674 2120 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 C15orf38-AP3S2A0A0A6YYH1 394 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 NPIPA5A0A0B4J1W7 369 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 NPIPA7E9PJI5 369 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 AQP7O14520 342 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 NPIPA8P0DM63 369 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 SUMO3P55854 103 aaPredicted RBP17.68■□□□□ 0.42
DDX55-207ENST00000540763 DSCR4P56555 118 aaPredicted RBP17.68■□□□□ 0.42
DDX55-207ENST00000540763 CHRNEQ04844 493 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 FGFBP1Q14512 234 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 CD226Q15762 336 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 PDZK1Q5T2W1 519 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 HACD2Q6Y1H2 254 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 Q6ZPB1 254 aaPredicted RBP17.68■□□□□ 0.42
DDX55-207ENST00000540763 ARPINQ7Z6K5 226 aa17.68■□□□□ 0.42
DDX55-207ENST00000540763 CMIPQ8IY22 773 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms