RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 CALML5Q9NZT1 146 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 C5AR2Q9P296 337 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 MAFFQ9ULX9 164 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 INSL5Q9Y5Q6 135 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 KCNMB2Q9Y691 235 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 COL4A3Q01955 1670 aa16.58■□□□□ 0.24
NUP54-205ENST00000507257 A0A1B0GTQ1 180 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 OR6C65A6NJZ3 312 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 KRBOX1C9JBD0 128 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 ZNF749O43361 778 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 SSNA1O43805 119 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 TMPRSS11DO60235 418 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 CH25HO95992 272 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 MT-ND5P03915 603 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 CKMP06732 381 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 SELPP16109 830 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 TYRP1P17643 537 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 KELP23276 732 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 SSTR2P30874 369 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 RAB8AP61006 207 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 ARHGAP19Q14CB8 494 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 NIPAL3Q6P499 406 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 ARSKQ6UWY0 536 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 KIAA1324Q6UXG2 1013 aaKnown RBP16.57■□□□□ 0.24
NUP54-205ENST00000507257 MEPCEQ7L2J0 689 aaKnown RBP16.57■□□□□ 0.24
NUP54-205ENST00000507257 NLRC3Q7RTR2 1065 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 RNF180Q86T96 592 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 C17orf64Q86WR6 236 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 CPOQ8IVL8 374 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 FTMTQ8N4E7 242 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 SLC44A3Q8N4M1 653 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 SPICQ8N5J4 248 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 BMPERQ8N8U9 685 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 OR51G2Q8NGK0 314 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 ABHD4Q8TB40 342 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 BRIX1Q8TDN6 353 aaKnown RBP16.57■□□□□ 0.24
NUP54-205ENST00000507257 SMIM4Q8WVI0 70 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 IGSF21Q96ID5 467 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 FCRL4Q96PJ5 515 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 TMPRSS13Q9BYE2 586 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 PLEKHA1Q9HB21 404 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 STARD7Q9NQZ5 370 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 NANSQ9NR45 359 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 CTPS2Q9NRF8 586 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 SAGE1Q9NXZ1 904 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 SPG21Q9NZD8 308 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 SLC13A4Q9UKG4 626 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 TRABD2BA6NFA1 517 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 PPM1BO75688 479 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 OR5F1O95221 314 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 CD3GP09693 182 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 PRKAR1BP31321 381 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 OR10A3P58181 314 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 TAS2R38P59533 333 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 SNTB2Q13425 540 aaKnown RBP16.57■□□□□ 0.24
NUP54-205ENST00000507257 OPCMLQ14982 345 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 LIPIQ6XZB0 460 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 MEX3DQ86XN8 651 aaKnown RBP16.57■□□□□ 0.24
NUP54-205ENST00000507257 SLC43A3Q8NBI5 491 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 OR56A1Q8NGH5 318 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 MS4A3Q96HJ5 214 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 LRIG1Q96JA1 1093 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 RBCK1Q9BYM8 510 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 ZDHHC5Q9C0B5 715 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 C20orf85Q9H1P6 137 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 LINC00597Q9H2U6 94 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 KRCC1Q9NPI7 259 aaPredicted RBP16.57■□□□□ 0.24
NUP54-205ENST00000507257 SLC35C2Q9NQQ7 365 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 NPDC1Q9NQX5 325 aaPredicted RBP16.57■□□□□ 0.24
NUP54-205ENST00000507257 TEX10Q9NXF1 929 aaPredicted RBP16.57■□□□□ 0.24
NUP54-205ENST00000507257 SESN1Q9Y6P5 492 aa16.57■□□□□ 0.24
NUP54-205ENST00000507257 A0A0A6YYD5 115 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 A0A1B0GUH1 482 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 NAP1L6A6NFF2 107 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 TOR1AO14656 332 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 NDUFS4O43181 175 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 LEFTY1O75610 366 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 SOD2P04179 222 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 RAB3BP20337 219 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 NTSP30990 170 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 HSD17B2P37059 387 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 MAP2K6P52564 334 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 DGCR2P98153 550 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 MLLT1Q03111 559 aaPredicted RBP16.56■□□□□ 0.24
NUP54-205ENST00000507257 CRYZQ08257 329 aaKnown RBP16.56■□□□□ 0.24
NUP54-205ENST00000507257 MAPK14Q16539 360 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 ELFN2Q5R3F8 820 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 METTL11BQ5VVY1 283 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 ASTLQ6HA08 431 aaPredicted RBP16.56■□□□□ 0.24
NUP54-205ENST00000507257 LMNTD1Q8N9Z9 388 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 DPYSL5Q9BPU6 564 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 NDC1Q9BTX1 674 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 PCBD2Q9H0N5 130 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 CD93Q9NPY3 652 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 SDHAF2Q9NX18 166 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 AKAP7Q9P0M2 348 aaPredicted RBP16.56■□□□□ 0.24
NUP54-205ENST00000507257 RPS6KB2Q9UBS0 482 aa16.56■□□□□ 0.24
NUP54-205ENST00000507257 PGRMC2O15173 223 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 WDPCPO95876 746 aa16.55■□□□□ 0.24
NUP54-205ENST00000507257 ASGR2P07307 311 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms