RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Sema4gQ9WUH7 837 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Plek2Q9WV52 353 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 PhipQ8VDD9 1821 aaKnown RBP13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Olfr1366A0A1W2P740 328 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Lrrc72A0A1Y7VMI0 288 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Olfr1056A2AVY0 313 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Saxo1B1AXP3 476 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 PigfO09101 219 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 FxnO35943 207 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Ap2s1P62743 142 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Nr4a2Q06219 598 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Tmem248Q3TBN1 314 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Mier2Q3U3N0 541 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 B3gnt6Q3USF0 391 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Tas2r136Q7TQA8 305 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Chst2Q80WV3 530 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 FgbQ8K0E8 481 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Ccdc58Q8R3Q6 144 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Fuca1Q99LJ1 452 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Ndufb2Q9CPU2 105 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Ppil3Q9D6L8 161 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Wdr53Q9DB94 358 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Dock2Q8C3J5 1828 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Hs3st4D3YVV6 449 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Gm16434J3QN10 205 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 4930555G01RikL7N253 205 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Grk6O70293 576 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Kcnk4O88454 398 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Hmx2P43687 273 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Nell1Q2VWQ2 810 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 MuskQ61006 868 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Sntb2Q61235 520 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 NovQ64299 354 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 ShbQ6PD21 503 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Ccdc187Q8C5V8 958 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 FRRS1Q8K385 592 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Gpr88Q9EPB7 384 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Tmem8aQ9ESN3 769 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Loxl3Q9Z175 754 aa13.08□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Gm266A6H634 200 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 NumblO08919 604 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Bhlhe40O35185 411 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Edil3O35474 480 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Irf1P15314 329 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Bmp7P23359 430 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Cdh11P55288 796 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Sox14Q04892 240 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Perm1Q149B8 807 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Malt1Q2TBA3 832 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Apcdd1Q3U128 514 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Vwa5b2Q3UR50 1248 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Sohlh1Q6IUP1 357 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Dcaf13Q6PAC3 445 aaKnown RBP13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Zbtb37Q8C3U9 504 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Olfr952Q8VFD7 314 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Dhrs1Q99L04 313 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Mrpl54Q9CPW3 135 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Olfr955Q9EQ97 314 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Acox1Q9R0H0 661 aaKnown RBP13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Rhox1B1APN4 224 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Trip11E9Q512 1976 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Gm21876F6XK35 94 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Kcnj5P48545 419 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Prelid2Q0VBB0 177 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 PimregQ8BFY7 231 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Olfr63Q8VBW9 316 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 C6E9Q6D8 931 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Vmn2r12L7N217 831 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Olfr1513L7N457 313 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 DhfrP00375 187 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 BdnfP21237 249 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Mmp25Q3U435 615 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 FcrlbQ5DRQ8 427 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Tm7sf2Q71KT5 418 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 HhipQ7TN16 700 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Tgm4Q8BZH1 670 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Yod1Q8CB27 343 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Tm6sf2Q8R1J1 378 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Mmgt2Q8R3L0 123 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Wdr73Q9CWR1 371 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Shmt2Q9CZN7 504 aaKnown RBP13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Vmn1r52Q9EP79 309 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Popdc3Q9ES81 291 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 MthfrQ9WU20 654 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Mthfd2lD3YZG8 338 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 RfngO09009 332 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Gcm2O09102 504 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Pfdn2O70591 154 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Csf1P07141 552 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Ifi204P0DOV2 619 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Slc2a9Q3T9X0 538 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Sgk494Q5SYL1 278 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 GnptgQ6S5C2 307 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Eci3Q78JN3 317 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Psmf1Q8BHL8 271 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Peli2Q8BST6 419 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Emid1Q91VF5 444 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Mrgpra5Q91ZC7 304 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Pbx4Q99NE9 378 aa13.07□□□□□ -0.32
Pcdha1-202ENSMUST00000193839 Lrrc18Q9CQ07 262 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms