RNA–Protein interactions for RNA: YPL190C

NAB3, Transcript of RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeast

Gene NAB3, Length 2,409 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NAB3	YPL190C	VAS1	P07806	1104 aa	Known RBP	3.13	□□□□□ -1.91
NAB3	YPL190C	ALG14	P38242	237 aa		3.13	□□□□□ -1.91
NAB3	YPL190C	GIP2	P40036	548 aa		3.13	□□□□□ -1.91
NAB3	YPL190C	SLS1	P42900	643 aa		3.13	□□□□□ -1.91
NAB3	YPL190C	MLC1	P53141	149 aa		3.13	□□□□□ -1.91
NAB3	YPL190C	YGR125W	P53273	1036 aa		3.13	□□□□□ -1.91
NAB3	YPL190C	UTP8	P53276	713 aa	Known RBP	3.13	□□□□□ -1.91
NAB3	YPL190C	NCE103	P53615	221 aa		3.13	□□□□□ -1.91
NAB3	YPL190C	ALO1	P54783	526 aa	Known RBP	3.13	□□□□□ -1.91
NAB3	YPL190C	SPO71	Q03868	1245 aa		3.13	□□□□□ -1.91
NAB3	YPL190C	NYV1	Q12255	253 aa		3.13	□□□□□ -1.91
NAB3	YPL190C	ADR1	P07248	1323 aa		3.13	□□□□□ -1.91
NAB3	YPL190C	CIT1	P00890	479 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	VMA4	P22203	233 aa	Known RBP	3.12	□□□□□ -1.91
NAB3	YPL190C	AFG2	P32794	780 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	AAP1	P37898	856 aa	Known RBP	3.12	□□□□□ -1.91
NAB3	YPL190C	KTR3	P38130	404 aa	Predicted RBP	3.12	□□□□□ -1.91
NAB3	YPL190C	MCM7	P38132	845 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	NEM1	P38757	446 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	PAN5	P38787	379 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	IRR1	P40541	1150 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	LEM3	P42838	414 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	YGL081W	P53156	320 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	COG6	P53959	839 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	VPS64	Q03944	604 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	TIF35	Q04067	274 aa	Known RBP	3.12	□□□□□ -1.91
NAB3	YPL190C	YDR215C	Q12240	137 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	OSH2	Q12451	1283 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	INO1	P11986	533 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	PDC5	P16467	563 aa	Known RBP	3.12	□□□□□ -1.91
NAB3	YPL190C	SRM1	P21827	482 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	YCK2	P23292	546 aa	Known RBP	3.12	□□□□□ -1.91
NAB3	YPL190C	THI4	P32318	326 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	BDH2	P39713	417 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	HYR1	P40581	163 aa	Known RBP	3.12	□□□□□ -1.91
NAB3	YPL190C	MRPS35	P53292	345 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	AVO1	Q08236	1176 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	RIM20	Q12033	661 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	TMA17	Q12513	150 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	MDM12	Q92328	271 aa		3.12	□□□□□ -1.91
NAB3	YPL190C	RNR2	P09938	399 aa	Known RBP	3.11	□□□□□ -1.91
NAB3	YPL190C	SAC7	P17121	654 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	RPA135	P22138	1203 aa	Known RBP	3.11	□□□□□ -1.91
NAB3	YPL190C	ADD66	P36040	267 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	REI1	P38344	393 aa	Predicted RBP	3.11	□□□□□ -1.91
NAB3	YPL190C	RRP8	P38961	392 aa	Known RBP	3.11	□□□□□ -1.91
NAB3	YPL190C	CCC2	P38995	1004 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	MBP1	P39678	833 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	ENT3	P47160	408 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	YNL034W	P53963	612 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	YNL018C	P53976	612 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	RAT1	Q02792	1006 aa	Known RBP	3.11	□□□□□ -1.91
NAB3	YPL190C	UTP5	Q04177	643 aa	Known RBP	3.11	□□□□□ -1.91
NAB3	YPL190C	SPO75	Q07798	868 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	OPI1	P21957	404 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	KNS1	P32350	737 aa	Predicted RBP	3.11	□□□□□ -1.91
NAB3	YPL190C	MRP8	P35719	219 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	PGM2	P37012	569 aa	Known RBP	3.11	□□□□□ -1.91
NAB3	YPL190C	OSH3	P38713	996 aa	Known RBP	3.11	□□□□□ -1.91
NAB3	YPL190C	GDH3	P39708	457 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	NPR2	P39923	615 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	SPO22	P40511	975 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	MSH4	P40965	878 aa	Predicted RBP	3.11	□□□□□ -1.91
NAB3	YPL190C	GPP1	P41277	250 aa	Known RBP	3.11	□□□□□ -1.91
NAB3	YPL190C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
NAB3	YPL190C	GIS4	Q04233	774 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	YIG1	Q08956	461 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	ALG6	Q12001	544 aa	Known RBP	3.11	□□□□□ -1.91
NAB3	YPL190C	YLL054C	Q12244	843 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	HBN1	Q96VH4	193 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	PDR18	P53756	1333 aa		3.11	□□□□□ -1.91
NAB3	YPL190C	SEC18	P18759	758 aa	Known RBP	3.1	□□□□□ -1.91
NAB3	YPL190C	NAR1	P23503	491 aa	Known RBP	3.1	□□□□□ -1.91
NAB3	YPL190C	SYP1	P25623	870 aa	Known RBP	3.1	□□□□□ -1.91
NAB3	YPL190C	SBA1	P28707	216 aa	Known RBP	3.1	□□□□□ -1.91
NAB3	YPL190C	ERT1	P38140	529 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	SLN1	P39928	1220 aa	Predicted RBP	3.1	□□□□□ -1.91
NAB3	YPL190C	SPO74	P45819	413 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	FCP1	Q03254	732 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	ELG1	Q12050	791 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	ARE1	P25628	610 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	ELM1	P32801	640 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	YKL107W	P34251	309 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	TAT1	P38085	619 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	MGS1	P40151	587 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	MPH1	P40562	993 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	DJP1	P40564	432 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	RPN11	P43588	306 aa	Known RBP	3.1	□□□□□ -1.91
NAB3	YPL190C	GCV1	P48015	400 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	HST1	P53685	503 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	UBP16	Q02863	499 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	PKH1	Q03407	766 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	UTP14	Q04500	899 aa	Known RBP	3.1	□□□□□ -1.91
NAB3	YPL190C	HRQ1	Q05549	1077 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	LAP2	Q10740	671 aa		3.1	□□□□□ -1.91
NAB3	YPL190C	GAL11	P19659	1081 aa		3.09	□□□□□ -1.91
NAB3	YPL190C	HSP60	P19882	572 aa	Known RBP	3.09	□□□□□ -1.91
NAB3	YPL190C	MIH1	P23748	554 aa		3.09	□□□□□ -1.91
NAB3	YPL190C	DBP2	P24783	546 aa	Known RBP	3.09	□□□□□ -1.91
NAB3	YPL190C	MRC1	P25588	1096 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms