RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeast

Gene TRM112, Length 408 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM112	YNR046W	XYL2	Q07993	356 aa		4.66	□□□□□ -1.66
TRM112	YNR046W	GIN4	Q12263	1142 aa		4.66	□□□□□ -1.66
TRM112	YNR046W	CYC7	P00045	113 aa		4.65	□□□□□ -1.67
TRM112	YNR046W	URA1	P28272	314 aa	Predicted RBP	4.65	□□□□□ -1.67
TRM112	YNR046W	CYS3	P31373	394 aa	Known RBP	4.65	□□□□□ -1.67
TRM112	YNR046W	STE13	P33894	931 aa		4.65	□□□□□ -1.67
TRM112	YNR046W	SAP190	P36123	1033 aa		4.65	□□□□□ -1.67
TRM112	YNR046W	DOT6	P40059	670 aa	Known RBP	4.65	□□□□□ -1.67
TRM112	YNR046W	RLP7	P40693	322 aa	Known RBP	4.65	□□□□□ -1.67
TRM112	YNR046W	CEP3	P40969	608 aa		4.65	□□□□□ -1.67
TRM112	YNR046W	ALY2	P47029	1046 aa		4.65	□□□□□ -1.67
TRM112	YNR046W	TAD1	P53065	400 aa		4.65	□□□□□ -1.67
TRM112	YNR046W	FOL1	P53848	824 aa		4.65	□□□□□ -1.67
TRM112	YNR046W	MSC2	Q03455	724 aa		4.65	□□□□□ -1.67
TRM112	YNR046W	NHX1	Q04121	633 aa		4.65	□□□□□ -1.67
TRM112	YNR046W	TMA17	Q12513	150 aa		4.65	□□□□□ -1.67
TRM112	YNR046W	DIF1	O13577	133 aa		4.64	□□□□□ -1.67
TRM112	YNR046W	GCD1	P09032	578 aa	Predicted RBP	4.64	□□□□□ -1.67
TRM112	YNR046W	TYE7	P33122	291 aa	Predicted RBP	4.64	□□□□□ -1.67
TRM112	YNR046W	PCM1	P38628	557 aa	Known RBP	4.64	□□□□□ -1.67
TRM112	YNR046W	CKB2	P38930	258 aa		4.64	□□□□□ -1.67
TRM112	YNR046W	SHR5	P41912	237 aa		4.64	□□□□□ -1.67
TRM112	YNR046W	RAI1	P53063	387 aa	Known RBP	4.64	□□□□□ -1.67
TRM112	YNR046W	SIZ1	Q04195	904 aa		4.64	□□□□□ -1.67
TRM112	YNR046W	ATG33	Q06485	197 aa		4.64	□□□□□ -1.67
TRM112	YNR046W	GUP2	Q08929	609 aa		4.64	□□□□□ -1.67
TRM112	YNR046W	ENA1	P13587	1091 aa		4.63	□□□□□ -1.67
TRM112	YNR046W	PRP19	P32523	503 aa	Known RBP	4.63	□□□□□ -1.67
TRM112	YNR046W	ABZ1	P37254	787 aa	Predicted RBP	4.63	□□□□□ -1.67
TRM112	YNR046W	HSL7	P38274	827 aa		4.63	□□□□□ -1.67
TRM112	YNR046W	ZRG8	P40021	1076 aa		4.63	□□□□□ -1.67
TRM112	YNR046W	PSP2	P50109	593 aa	Known RBP	4.63	□□□□□ -1.67
TRM112	YNR046W	GPG1	P53130	126 aa		4.63	□□□□□ -1.67
TRM112	YNR046W	PUS2	P53167	370 aa		4.63	□□□□□ -1.67
TRM112	YNR046W	YGR012W	P53206	393 aa		4.63	□□□□□ -1.67
TRM112	YNR046W	HDA1	P53973	706 aa		4.63	□□□□□ -1.67
TRM112	YNR046W	ENA2	Q01896	1091 aa		4.63	□□□□□ -1.67
TRM112	YNR046W	MTQ2	Q03920	221 aa	Predicted RBP	4.63	□□□□□ -1.67
TRM112	YNR046W	MED7	Q08278	222 aa		4.63	□□□□□ -1.67
TRM112	YNR046W	ENA5	Q12691	1091 aa		4.63	□□□□□ -1.67
TRM112	YNR046W	PRC1	P00729	532 aa		4.62	□□□□□ -1.67
TRM112	YNR046W	SRP101	P32916	621 aa		4.62	□□□□□ -1.67
TRM112	YNR046W	SET5	P38890	526 aa	Known RBP	4.62	□□□□□ -1.67
TRM112	YNR046W	GPP1	P41277	250 aa	Known RBP	4.62	□□□□□ -1.67
TRM112	YNR046W	YJR096W	P47137	282 aa		4.62	□□□□□ -1.67
TRM112	YNR046W	AIM14	P53109	570 aa		4.62	□□□□□ -1.67
TRM112	YNR046W	ORC3	P54790	616 aa		4.62	□□□□□ -1.67
TRM112	YNR046W	YKR011C	Q02209	353 aa		4.62	□□□□□ -1.67
TRM112	YNR046W	TRE2	Q08693	809 aa		4.62	□□□□□ -1.67
TRM112	YNR046W	YTM1	Q12024	460 aa	Predicted RBP	4.62	□□□□□ -1.67
TRM112	YNR046W	LPX1	Q12405	387 aa	Known RBP	4.62	□□□□□ -1.67
TRM112	YNR046W	RPP2A	P05319	106 aa	Known RBP	4.61	□□□□□ -1.67
TRM112	YNR046W	CMP2	P14747	604 aa		4.61	□□□□□ -1.67
TRM112	YNR046W	ATG19	P35193	415 aa		4.61	□□□□□ -1.67
TRM112	YNR046W	LRS4	Q04087	347 aa	Known RBP	4.61	□□□□□ -1.67
TRM112	YNR046W	YOR352W	Q08816	343 aa		4.61	□□□□□ -1.67
TRM112	YNR046W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
TRM112	YNR046W	YBR182C-A	Q8TGU6	64 aa		4.61	□□□□□ -1.67
TRM112	YNR046W	HMG1	P12683	1054 aa		4.6	□□□□□ -1.67
TRM112	YNR046W	YCL002C	P25565	263 aa		4.6	□□□□□ -1.67
TRM112	YNR046W	EUG1	P32474	517 aa		4.6	□□□□□ -1.67
TRM112	YNR046W	YBR071W	P38243	211 aa		4.6	□□□□□ -1.67
TRM112	YNR046W	YIL108W	P40483	696 aa	Known RBP	4.6	□□□□□ -1.67
TRM112	YNR046W	GZF3	P42944	551 aa	Known RBP	4.6	□□□□□ -1.67
TRM112	YNR046W	YFL052W	P43551	465 aa		4.6	□□□□□ -1.67
TRM112	YNR046W	HXT16	P47185	567 aa		4.6	□□□□□ -1.67
TRM112	YNR046W	NPY1	P53164	384 aa		4.6	□□□□□ -1.67
TRM112	YNR046W	PBP1	P53297	722 aa	Known RBP	4.6	□□□□□ -1.67
TRM112	YNR046W	CDA1	Q06702	301 aa		4.6	□□□□□ -1.67
TRM112	YNR046W	YPL277C	Q08989	487 aa		4.6	□□□□□ -1.67
TRM112	YNR046W	RIB2	Q12362	591 aa	Known RBP	4.6	□□□□□ -1.67
TRM112	YNR046W	CYC1	P00044	109 aa	Predicted RBP	4.59	□□□□□ -1.67
TRM112	YNR046W	TRP3	P00937	484 aa		4.59	□□□□□ -1.67
TRM112	YNR046W	NIT1	P40447	199 aa		4.59	□□□□□ -1.67
TRM112	YNR046W	MND2	P40577	368 aa		4.59	□□□□□ -1.67
TRM112	YNR046W	DUG1	P43616	481 aa	Known RBP	4.59	□□□□□ -1.67
TRM112	YNR046W	CCT8	P47079	568 aa	Known RBP	4.59	□□□□□ -1.67
TRM112	YNR046W	CRR1	Q05790	422 aa		4.59	□□□□□ -1.67
TRM112	YNR046W	YOR022C	Q12204	715 aa		4.59	□□□□□ -1.67
TRM112	YNR046W	TMA7	Q3E764	64 aa	Known RBP	4.59	□□□□□ -1.67
TRM112	YNR046W	RPD3	P32561	433 aa		4.58	□□□□□ -1.68
TRM112	YNR046W	HSP78	P33416	811 aa		4.58	□□□□□ -1.68
TRM112	YNR046W	DID4	P36108	232 aa		4.58	□□□□□ -1.68
TRM112	YNR046W	POA1	P38218	177 aa		4.58	□□□□□ -1.68
TRM112	YNR046W	TOS1	P38288	455 aa		4.58	□□□□□ -1.68
TRM112	YNR046W	ATG36	P46983	293 aa		4.58	□□□□□ -1.68
TRM112	YNR046W	YJR120W	P47157	116 aa		4.58	□□□□□ -1.68
TRM112	YNR046W	YOL057W	Q08225	711 aa		4.58	□□□□□ -1.68
TRM112	YNR046W	THI21	Q08975	551 aa		4.58	□□□□□ -1.68
TRM112	YNR046W	GAL10	P04397	699 aa		4.57	□□□□□ -1.68
TRM112	YNR046W	SPE1	P08432	466 aa		4.57	□□□□□ -1.68
TRM112	YNR046W	CCR4	P31384	837 aa	Known RBP	4.57	□□□□□ -1.68
TRM112	YNR046W	TDA3	P38758	523 aa		4.57	□□□□□ -1.68
TRM112	YNR046W	OAF1	P39720	1047 aa	Predicted RBP	4.57	□□□□□ -1.68
TRM112	YNR046W	RET2	P43621	546 aa		4.57	□□□□□ -1.68
TRM112	YNR046W	MNN11	P46985	422 aa	Known RBP	4.57	□□□□□ -1.68
TRM112	YNR046W	BNA2	P47125	453 aa		4.57	□□□□□ -1.68
TRM112	YNR046W	YGR153W	P48238	217 aa		4.57	□□□□□ -1.68
TRM112	YNR046W	UBC9	P50623	157 aa	Predicted RBP	4.57	□□□□□ -1.68
TRM112	YNR046W	ZIP2	P53061	704 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms