RNA–Protein interactions for RNA: YJL104W

PAM16, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM16, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM16	YJL104W	CDC12	P32468	407 aa	Known RBP	2.83	□□□□□ -1.96
PAM16	YJL104W	RGT1	P32862	1170 aa		2.83	□□□□□ -1.96
PAM16	YJL104W	YKR078W	P36158	585 aa	Known RBP	2.83	□□□□□ -1.96
PAM16	YJL104W	FKH2	P41813	862 aa		2.83	□□□□□ -1.96
PAM16	YJL104W	GYP7	P48365	746 aa		2.83	□□□□□ -1.96
PAM16	YJL104W	NOT3	P06102	836 aa	Known RBP	2.82	□□□□□ -1.96
PAM16	YJL104W	MGE1	P38523	228 aa		2.82	□□□□□ -1.96
PAM16	YJL104W	RPP1	P38786	293 aa		2.82	□□□□□ -1.96
PAM16	YJL104W	AMA1	P50082	593 aa		2.82	□□□□□ -1.96
PAM16	YJL104W	RIM13	Q03792	727 aa		2.82	□□□□□ -1.96
PAM16	YJL104W	SEG1	Q04279	960 aa		2.82	□□□□□ -1.96
PAM16	YJL104W	SPO20	Q04359	397 aa		2.82	□□□□□ -1.96
PAM16	YJL104W	RPN13	O13563	156 aa		2.81	□□□□□ -1.96
PAM16	YJL104W	TUB3	P09734	445 aa	Known RBP	2.81	□□□□□ -1.96
PAM16	YJL104W	STE13	P33894	931 aa		2.81	□□□□□ -1.96
PAM16	YJL104W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	2.81	□□□□□ -1.96	not detected
PAM16	YJL104W	YBR053C	P38235	358 aa		2.81	□□□□□ -1.96
PAM16	YJL104W	CBR1	P38626	284 aa	Known RBP	2.81	□□□□□ -1.96
PAM16	YJL104W	YGR053C	P53234	283 aa		2.81	□□□□□ -1.96
PAM16	YJL104W	MRPS35	P53292	345 aa		2.81	□□□□□ -1.96
PAM16	YJL104W	SSL2	Q00578	843 aa		2.81	□□□□□ -1.96
PAM16	YJL104W	SSL1	Q04673	461 aa	Predicted RBP	2.81	□□□□□ -1.96
PAM16	YJL104W	SGO1	Q08490	590 aa		2.81	□□□□□ -1.96
PAM16	YJL104W	FBP1	P09201	348 aa		2.8	□□□□□ -1.96
PAM16	YJL104W	HOM2	P13663	365 aa	Known RBP	2.8	□□□□□ -1.96
PAM16	YJL104W	CDC48	P25694	835 aa	Known RBP	2.8	□□□□□ -1.96
PAM16	YJL104W	YJL206C	P39529	758 aa		2.8	□□□□□ -1.96
PAM16	YJL104W	PTP1	P25044	335 aa		2.79	□□□□□ -1.96
PAM16	YJL104W	MCM2	P29469	868 aa		2.79	□□□□□ -1.96
PAM16	YJL104W	CTF8	P38877	133 aa		2.79	□□□□□ -1.96
PAM16	YJL104W	YIL108W	P40483	696 aa	Known RBP	2.79	□□□□□ -1.96
PAM16	YJL104W	EEB1	Q02891	456 aa		2.79	□□□□□ -1.96
PAM16	YJL104W	RGT2	Q12300	763 aa		2.79	□□□□□ -1.96
PAM16	YJL104W	TSL1	P38427	1098 aa	Known RBP	2.78	□□□□□ -1.96
PAM16	YJL104W	YEL020C	P39994	560 aa		2.78	□□□□□ -1.96
PAM16	YJL104W	LTP1	P40347	161 aa		2.78	□□□□□ -1.96
PAM16	YJL104W	HSV2	P50079	448 aa	Predicted RBP	2.78	□□□□□ -1.96
PAM16	YJL104W	MPS1	P54199	764 aa		2.78	□□□□□ -1.96
PAM16	YJL104W	SPR28	Q04921	423 aa		2.78	□□□□□ -1.96
PAM16	YJL104W	DUS3	Q06053	668 aa	Known RBP	2.78	□□□□□ -1.96
PAM16	YJL104W	YBR238C	P38330	731 aa	Known RBP	2.77	□□□□□ -1.97
PAM16	YJL104W	IPL1	P38991	367 aa		2.77	□□□□□ -1.97
PAM16	YJL104W	FMP52	P40008	231 aa		2.77	□□□□□ -1.97
PAM16	YJL104W	BNA3	P47039	444 aa	Known RBP	2.77	□□□□□ -1.97
PAM16	YJL104W	BPL1	P48445	690 aa	Predicted RBP	2.77	□□□□□ -1.97
PAM16	YJL104W	TEL2	P53038	688 aa		2.77	□□□□□ -1.97
PAM16	YJL104W	SMX3	P54999	86 aa	Predicted RBP	2.77	□□□□□ -1.97
PAM16	YJL104W	YLR225C	Q05948	407 aa	Known RBP	2.77	□□□□□ -1.97
PAM16	YJL104W	TAF3	Q12297	353 aa		2.77	□□□□□ -1.97
PAM16	YJL104W	VPS34	P22543	875 aa		2.76	□□□□□ -1.97
PAM16	YJL104W	NGG1	P32494	702 aa		2.76	□□□□□ -1.97
PAM16	YJL104W	TYE7	P33122	291 aa	Predicted RBP	2.76	□□□□□ -1.97
PAM16	YJL104W	DUT1	P33317	147 aa		2.76	□□□□□ -1.97
PAM16	YJL104W	YIR042C	P40586	236 aa		2.76	□□□□□ -1.97
PAM16	YJL104W	KRI1	P42846	591 aa	Known RBP	2.76	□□□□□ -1.97
PAM16	YJL104W	NET1	P47035	1189 aa		2.76	□□□□□ -1.97
PAM16	YJL104W	YKE2	P52553	114 aa		2.76	□□□□□ -1.97
PAM16	YJL104W	PKH1	Q03407	766 aa		2.76	□□□□□ -1.97
PAM16	YJL104W	IRC13	Q08630	104 aa		2.76	□□□□□ -1.97
PAM16	YJL104W	CDC34	P14682	295 aa		2.75	□□□□□ -1.97
PAM16	YJL104W	RPD3	P32561	433 aa		2.75	□□□□□ -1.97
PAM16	YJL104W	HIS7	P33734	552 aa	Known RBP	2.75	□□□□□ -1.97
PAM16	YJL104W	YHR078W	P38799	552 aa		2.75	□□□□□ -1.97
PAM16	YJL104W	RMD1	Q03441	430 aa		2.75	□□□□□ -1.97
PAM16	YJL104W	YLR149C	Q99296	730 aa		2.75	□□□□□ -1.97
PAM16	YJL104W	RFA1	P22336	621 aa	Known RBP	2.74	□□□□□ -1.97
PAM16	YJL104W	VHR1	P40522	640 aa		2.74	□□□□□ -1.97
PAM16	YJL104W	YAP1802	P53309	568 aa		2.74	□□□□□ -1.97
PAM16	YJL104W	LAT1	P12695	482 aa	Known RBP	2.73	□□□□□ -1.97
PAM16	YJL104W	PPH3	P32345	308 aa		2.73	□□□□□ -1.97
PAM16	YJL104W	EMP70	P32802	667 aa		2.73	□□□□□ -1.97
PAM16	YJL104W	GGA2	P38817	585 aa	Known RBP	2.73	□□□□□ -1.97
PAM16	YJL104W	MET10	P39692	1035 aa		2.73	□□□□□ -1.97
PAM16	YJL104W	FYV10	P40492	516 aa		2.73	□□□□□ -1.97
PAM16	YJL104W	YJR107W	P47145	328 aa		2.73	□□□□□ -1.97
PAM16	YJL104W	YKR011C	Q02209	353 aa		2.73	□□□□□ -1.97
PAM16	YJL104W	TDA9	Q04545	1251 aa		2.73	□□□□□ -1.97
PAM16	YJL104W	PET112	P33893	541 aa		2.72	□□□□□ -1.97
PAM16	YJL104W	SLD2	P34252	453 aa		2.72	□□□□□ -1.97
PAM16	YJL104W	BDH2	P39713	417 aa		2.72	□□□□□ -1.97
PAM16	YJL104W	PAC2	P39937	518 aa		2.72	□□□□□ -1.97
PAM16	YJL104W	CCT7	P42943	550 aa	Known RBP	2.72	□□□□□ -1.97
PAM16	YJL104W	POL32	P47110	350 aa		2.72	□□□□□ -1.97
PAM16	YJL104W	ASI2	P53895	289 aa		2.72	□□□□□ -1.97
PAM16	YJL104W	NRG1	Q03125	231 aa		2.72	□□□□□ -1.97
PAM16	YJL104W	OSW1	Q08692	278 aa		2.72	□□□□□ -1.97
PAM16	YJL104W	MPH2	P0CD99	609 aa		2.71	□□□□□ -1.98
PAM16	YJL104W	PRP4	P20053	465 aa	Known RBP	2.71	□□□□□ -1.98
PAM16	YJL104W	CLN2	P20438	545 aa		2.71	□□□□□ -1.98
PAM16	YJL104W	BCD1	P38772	366 aa		2.71	□□□□□ -1.98
PAM16	YJL104W	NDC80	P40460	691 aa		2.71	□□□□□ -1.98
PAM16	YJL104W	CEP3	P40969	608 aa		2.71	□□□□□ -1.98
PAM16	YJL104W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
PAM16	YJL104W	XBP1	P40489	647 aa		2.7	□□□□□ -1.98
PAM16	YJL104W	MRK1	P50873	501 aa		2.7	□□□□□ -1.98
PAM16	YJL104W	ESC2	Q06340	456 aa		2.7	□□□□□ -1.98
PAM16	YJL104W	RPS9A	O13516	197 aa	Known RBP	2.69	□□□□□ -1.98
PAM16	YJL104W	ADE8	P04161	214 aa		2.69	□□□□□ -1.98
PAM16	YJL104W	ERG11	P10614	530 aa		2.69	□□□□□ -1.98
PAM16	YJL104W	NPP1	P25353	742 aa		2.69	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 69.8 ms