RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	MCM7	P38132	845 aa		4.37	□□□□□ -1.71
SPI1	YER150W	SIT1	P39980	628 aa		4.37	□□□□□ -1.71
SPI1	YER150W	AIM20	P40451	204 aa		4.37	□□□□□ -1.71
SPI1	YER150W	QRI7	P43122	407 aa		4.37	□□□□□ -1.71
SPI1	YER150W	RAD17	P48581	401 aa		4.37	□□□□□ -1.71
SPI1	YER150W	SUT1	P53032	299 aa	Known RBP	4.37	□□□□□ -1.71
SPI1	YER150W	KRE33	P53914	1056 aa	Known RBP	4.37	□□□□□ -1.71
SPI1	YER150W	HED1	Q03937	162 aa		4.37	□□□□□ -1.71
SPI1	YER150W	BLS1	Q06071	122 aa		4.37	□□□□□ -1.71
SPI1	YER150W	CUE5	Q08412	411 aa	Known RBP	4.37	□□□□□ -1.71
SPI1	YER150W	SFI1	Q12369	946 aa		4.37	□□□□□ -1.71
SPI1	YER150W	RKM4	Q12504	494 aa		4.37	□□□□□ -1.71
SPI1	YER150W	RPB2	P08518	1224 aa	Known RBP	4.36	□□□□□ -1.71
SPI1	YER150W	ILS1	P09436	1072 aa	Known RBP	4.36	□□□□□ -1.71
SPI1	YER150W	HOM2	P13663	365 aa	Known RBP	4.36	□□□□□ -1.71
SPI1	YER150W	PMS1	P14242	873 aa		4.36	□□□□□ -1.71
SPI1	YER150W	KAR3	P17119	729 aa		4.36	□□□□□ -1.71
SPI1	YER150W	AAC3	P18238	307 aa		4.36	□□□□□ -1.71
SPI1	YER150W	VBA3	P25594	458 aa		4.36	□□□□□ -1.71
SPI1	YER150W	NTG1	P31378	399 aa		4.36	□□□□□ -1.71
SPI1	YER150W	PRP19	P32523	503 aa	Known RBP	4.36	□□□□□ -1.71
SPI1	YER150W	MDL1	P33310	695 aa		4.36	□□□□□ -1.71
SPI1	YER150W	YEL1	P34225	687 aa		4.36	□□□□□ -1.71
SPI1	YER150W	SEG2	P34250	1132 aa		4.36	□□□□□ -1.71
SPI1	YER150W	MUD2	P36084	527 aa	Known RBP	4.36	□□□□□ -1.71
SPI1	YER150W	PEX18	P38855	283 aa		4.36	□□□□□ -1.71
SPI1	YER150W	YER034W	P40022	185 aa	Known RBP	4.36	□□□□□ -1.71
SPI1	YER150W	TPA1	P40032	644 aa	Known RBP	4.36	□□□□□ -1.71
SPI1	YER150W	KAP123	P40069	1113 aa	Known RBP	4.36	□□□□□ -1.71
SPI1	YER150W	EMP65	P40085	556 aa		4.36	□□□□□ -1.71
SPI1	YER150W	AGX1	P43567	385 aa		4.36	□□□□□ -1.71
SPI1	YER150W	VPS53	P47061	822 aa		4.36	□□□□□ -1.71
SPI1	YER150W	YJR096W	P47137	282 aa		4.36	□□□□□ -1.71
SPI1	YER150W	MET13	P53128	600 aa		4.36	□□□□□ -1.71
SPI1	YER150W	YNL247W	P53852	767 aa	Known RBP	4.36	□□□□□ -1.71
SPI1	YER150W	CTR9	P89105	1077 aa		4.36	□□□□□ -1.71
SPI1	YER150W	FDC1	Q03034	503 aa		4.36	□□□□□ -1.71
SPI1	YER150W	HOT1	Q03213	719 aa		4.36	□□□□□ -1.71
SPI1	YER150W	ADI1	Q03677	179 aa		4.36	□□□□□ -1.71
SPI1	YER150W	YPR084W	Q06821	456 aa		4.36	□□□□□ -1.71
SPI1	YER150W	INP54	Q08227	384 aa	Known RBP	4.36	□□□□□ -1.71
SPI1	YER150W	YLL054C	Q12244	843 aa		4.36	□□□□□ -1.71
SPI1	YER150W	RMP1	Q12530	201 aa		4.36	□□□□□ -1.71
SPI1	YER150W	MET8	P15807	274 aa		4.35	□□□□□ -1.71
SPI1	YER150W	DAL7	P21826	554 aa		4.35	□□□□□ -1.71
SPI1	YER150W	PAT1	P25644	796 aa	Known RBP	4.35	□□□□□ -1.71
SPI1	YER150W	MCM5	P29496	775 aa	Known RBP	4.35	□□□□□ -1.71
SPI1	YER150W	HEM12	P32347	362 aa	Predicted RBP	4.35	□□□□□ -1.71
SPI1	YER150W	ABD1	P32783	436 aa	Predicted RBP	4.35	□□□□□ -1.71
SPI1	YER150W	DLD1	P32891	587 aa		4.35	□□□□□ -1.71
SPI1	YER150W	KTR2	P33550	425 aa		4.35	□□□□□ -1.71
SPI1	YER150W	MDJ1	P35191	511 aa		4.35	□□□□□ -1.71
SPI1	YER150W	BIT2	P38346	545 aa		4.35	□□□□□ -1.71
SPI1	YER150W	CTM1	P38818	585 aa		4.35	□□□□□ -1.71
SPI1	YER150W	OAF1	P39720	1047 aa	Predicted RBP	4.35	□□□□□ -1.71
SPI1	YER150W	ARB1	P40024	610 aa	Known RBP	4.35	□□□□□ -1.71
SPI1	YER150W	PIC2	P40035	300 aa		4.35	□□□□□ -1.71
SPI1	YER150W	FMP10	P40098	244 aa		4.35	□□□□□ -1.71
SPI1	YER150W	VHR1	P40522	640 aa		4.35	□□□□□ -1.71
SPI1	YER150W	FIG4	P42837	879 aa		4.35	□□□□□ -1.71
SPI1	YER150W	POL31	P46957	487 aa		4.35	□□□□□ -1.71
SPI1	YER150W	MAD3	P47074	515 aa		4.35	□□□□□ -1.71
SPI1	YER150W	MDE1	P47095	244 aa		4.35	□□□□□ -1.71
SPI1	YER150W	NUP84	P52891	726 aa		4.35	□□□□□ -1.71
SPI1	YER150W	ZIP2	P53061	704 aa		4.35	□□□□□ -1.71
SPI1	YER150W	PCL10	P53124	433 aa		4.35	□□□□□ -1.71
SPI1	YER150W	SFB2	P53953	876 aa		4.35	□□□□□ -1.71
SPI1	YER150W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
SPI1	YER150W	RRN5	Q02983	363 aa		4.35	□□□□□ -1.71
SPI1	YER150W	CAB1	Q04430	367 aa		4.35	□□□□□ -1.71
SPI1	YER150W	YCG1	Q06680	1035 aa		4.35	□□□□□ -1.71
SPI1	YER150W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
SPI1	YER150W	GFA1	P14742	717 aa	Known RBP	4.34	□□□□□ -1.71
SPI1	YER150W	OM45	P16547	393 aa		4.34	□□□□□ -1.71
SPI1	YER150W	DIT1	P21623	536 aa		4.34	□□□□□ -1.71
SPI1	YER150W	MNE1	P24720	663 aa		4.34	□□□□□ -1.71
SPI1	YER150W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected
SPI1	YER150W	RSC6	P25632	483 aa		4.34	□□□□□ -1.71
SPI1	YER150W	NAM7	P30771	971 aa	Known RBP	4.34	□□□□□ -1.71
SPI1	YER150W	EFB1	P32471	206 aa	Known RBP	4.34	□□□□□ -1.71
SPI1	YER150W	SSE1	P32589	693 aa	Known RBP	4.34	□□□□□ -1.71
SPI1	YER150W	PPQ1	P32945	549 aa		4.34	□□□□□ -1.71
SPI1	YER150W	ASH1	P34233	588 aa		4.34	□□□□□ -1.71
SPI1	YER150W	MTH1	P35198	433 aa		4.34	□□□□□ -1.71
SPI1	YER150W	SEA4	P38164	1038 aa		4.34	□□□□□ -1.71
SPI1	YER150W	YBL028C	P38202	106 aa		4.34	□□□□□ -1.71
SPI1	YER150W	REI1	P38344	393 aa	Predicted RBP	4.34	□□□□□ -1.71
SPI1	YER150W	RFC1	P38630	861 aa	Known RBP	4.34	□□□□□ -1.71
SPI1	YER150W	YLF2	P38746	405 aa		4.34	□□□□□ -1.71
SPI1	YER150W	CKB2	P38930	258 aa		4.34	□□□□□ -1.71
SPI1	YER150W	VPS45	P38932	577 aa		4.34	□□□□□ -1.71
SPI1	YER150W	SMC2	P38989	1170 aa	Known RBP	4.34	□□□□□ -1.71
SPI1	YER150W	KHA1	P40309	873 aa		4.34	□□□□□ -1.71
SPI1	YER150W	SBE2	P42223	864 aa	Known RBP	4.34	□□□□□ -1.71
SPI1	YER150W	CCT7	P42943	550 aa	Known RBP	4.34	□□□□□ -1.71
SPI1	YER150W	GZF3	P42944	551 aa	Known RBP	4.34	□□□□□ -1.71
SPI1	YER150W	SAP155	P43612	1002 aa		4.34	□□□□□ -1.71
SPI1	YER150W	YJL055W	P47044	245 aa		4.34	□□□□□ -1.71
SPI1	YER150W	GYP7	P48365	746 aa		4.34	□□□□□ -1.71
SPI1	YER150W	FOL2	P51601	243 aa	Known RBP	4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms