RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN3	YER021W	SIZ1	Q04195	904 aa		4.24	□□□□□ -1.73
RPN3	YER021W	CDA2	Q06703	312 aa		4.24	□□□□□ -1.73
RPN3	YER021W	BNR1	P40450	1375 aa		4.24	□□□□□ -1.73
RPN3	YER021W	KIN2	P13186	1147 aa	Known RBP	4.23	□□□□□ -1.73
RPN3	YER021W	CCC2	P38995	1004 aa		4.23	□□□□□ -1.73
RPN3	YER021W	RSP5	P39940	809 aa	Known RBP	4.23	□□□□□ -1.73
RPN3	YER021W	TPO2	P53283	614 aa		4.23	□□□□□ -1.73
RPN3	YER021W	MRPL22	P53881	309 aa		4.23	□□□□□ -1.73
RPN3	YER021W	ORC1	P54784	914 aa	Predicted RBP	4.23	□□□□□ -1.73
RPN3	YER021W	MSC2	Q03455	724 aa		4.23	□□□□□ -1.73
RPN3	YER021W	RPN4	Q03465	531 aa		4.23	□□□□□ -1.73
RPN3	YER021W	HBN1	Q96VH4	193 aa		4.23	□□□□□ -1.73
RPN3	YER021W	CMP2	P14747	604 aa		4.23	□□□□□ -1.73
RPN3	YER021W	FUN30	P31380	1131 aa		4.23	□□□□□ -1.73
RPN3	YER021W	YKL091C	P33324	310 aa	Known RBP	4.23	□□□□□ -1.73
RPN3	YER021W	ERT1	P38140	529 aa		4.23	□□□□□ -1.73
RPN3	YER021W	YBR284W	P38150	797 aa		4.23	□□□□□ -1.73
RPN3	YER021W	TSL1	P38427	1098 aa	Known RBP	4.23	□□□□□ -1.73
RPN3	YER021W	YAP1801	P38856	637 aa		4.23	□□□□□ -1.73
RPN3	YER021W	SNO2	P53823	222 aa		4.23	□□□□□ -1.73
RPN3	YER021W	SFB2	P53953	876 aa		4.23	□□□□□ -1.73
RPN3	YER021W	TAF8	Q03750	510 aa		4.23	□□□□□ -1.73
RPN3	YER021W	BUL2	Q03758	920 aa	Known RBP	4.23	□□□□□ -1.73
RPN3	YER021W	PPM2	Q08282	695 aa		4.23	□□□□□ -1.73
RPN3	YER021W	OSW2	Q12202	724 aa		4.23	□□□□□ -1.73
RPN3	YER021W	ADE8	P04161	214 aa		4.22	□□□□□ -1.73
RPN3	YER021W	GAL10	P04397	699 aa		4.22	□□□□□ -1.73
RPN3	YER021W	YRO2	P38079	344 aa		4.22	□□□□□ -1.73
RPN3	YER021W	GYP7	P48365	746 aa		4.22	□□□□□ -1.73
RPN3	YER021W	PRP43	P53131	767 aa	Known RBP	4.22	□□□□□ -1.73
RPN3	YER021W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
RPN3	YER021W	MAK10	Q02197	733 aa		4.22	□□□□□ -1.73
RPN3	YER021W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
RPN3	YER021W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.21	□□□□□ -1.74
RPN3	YER021W	CAN1	P04817	590 aa		4.21	□□□□□ -1.74
RPN3	YER021W	TOP3	P13099	656 aa		4.21	□□□□□ -1.74
RPN3	YER021W	CDC11	P32458	415 aa		4.21	□□□□□ -1.74
RPN3	YER021W	THI80	P35202	319 aa		4.21	□□□□□ -1.74
RPN3	YER021W	BET3	P36149	193 aa		4.21	□□□□□ -1.74
RPN3	YER021W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
RPN3	YER021W	ECM21	P38167	1117 aa	Known RBP	4.21	□□□□□ -1.74
RPN3	YER021W	YER158C	P40095	573 aa		4.21	□□□□□ -1.74
RPN3	YER021W	BUD6	P41697	788 aa		4.21	□□□□□ -1.74
RPN3	YER021W	PLB2	Q03674	706 aa		4.21	□□□□□ -1.74
RPN3	YER021W	SGD1	Q06132	899 aa		4.21	□□□□□ -1.74
RPN3	YER021W	YPR071W	Q12346	211 aa		4.21	□□□□□ -1.74
RPN3	YER021W	YOR131C	Q12486	218 aa		4.21	□□□□□ -1.74
RPN3	YER021W	MSD1	P15179	658 aa	Known RBP	4.2	□□□□□ -1.74
RPN3	YER021W	YKR078W	P36158	585 aa	Known RBP	4.2	□□□□□ -1.74
RPN3	YER021W	YAP3	P38749	330 aa		4.2	□□□□□ -1.74
RPN3	YER021W	TOK1	P40310	691 aa		4.2	□□□□□ -1.74
RPN3	YER021W	HUL4	P40985	892 aa		4.2	□□□□□ -1.74
RPN3	YER021W	RTA1	P53047	317 aa		4.2	□□□□□ -1.74
RPN3	YER021W	ROT1	Q03691	256 aa		4.2	□□□□□ -1.74
RPN3	YER021W	LCD1	Q04377	747 aa		4.2	□□□□□ -1.74
RPN3	YER021W	YSP2	Q06681	1438 aa		4.19	□□□□□ -1.74
RPN3	YER021W	PET10	P36139	283 aa		4.19	□□□□□ -1.74
RPN3	YER021W	GGA2	P38817	585 aa	Known RBP	4.19	□□□□□ -1.74
RPN3	YER021W	LAM1	P38851	1228 aa		4.19	□□□□□ -1.74
RPN3	YER021W	YKE2	P52553	114 aa		4.19	□□□□□ -1.74
RPN3	YER021W	YDL124W	Q07551	312 aa	Known RBP	4.19	□□□□□ -1.74
RPN3	YER021W	GAL11	P19659	1081 aa		4.19	□□□□□ -1.74
RPN3	YER021W	CDC48	P25694	835 aa	Known RBP	4.19	□□□□□ -1.74
RPN3	YER021W	YBR238C	P38330	731 aa	Known RBP	4.19	□□□□□ -1.74
RPN3	YER021W	MEF2	P39677	819 aa		4.19	□□□□□ -1.74
RPN3	YER021W	YDR132C	Q03900	495 aa		4.19	□□□□□ -1.74
RPN3	YER021W	CIT2	P08679	460 aa		4.18	□□□□□ -1.74
RPN3	YER021W	ERR1	P0CX10	437 aa		4.18	□□□□□ -1.74
RPN3	YER021W	ERR2	P0CX11	437 aa		4.18	□□□□□ -1.74
RPN3	YER021W	TIM23	P32897	222 aa		4.18	□□□□□ -1.74
RPN3	YER021W	SRP101	P32916	621 aa		4.18	□□□□□ -1.74
RPN3	YER021W	AIM3	P38266	947 aa	Known RBP	4.18	□□□□□ -1.74
RPN3	YER021W	CHZ1	P40019	153 aa	Predicted RBP	4.18	□□□□□ -1.74
RPN3	YER021W	ZRG8	P40021	1076 aa		4.18	□□□□□ -1.74
RPN3	YER021W	MND2	P40577	368 aa		4.18	□□□□□ -1.74
RPN3	YER021W	UBP6	P43593	499 aa	Known RBP	4.18	□□□□□ -1.74
RPN3	YER021W	CCM1	P48237	864 aa	Predicted RBP	4.18	□□□□□ -1.74
RPN3	YER021W	YGR012W	P53206	393 aa		4.18	□□□□□ -1.74
RPN3	YER021W	DUS4	Q06063	367 aa		4.18	□□□□□ -1.74
RPN3	YER021W	YPR196W	Q06595	470 aa		4.18	□□□□□ -1.74
RPN3	YER021W	CDA1	Q06702	301 aa		4.18	□□□□□ -1.74
RPN3	YER021W	YOR352W	Q08816	343 aa		4.18	□□□□□ -1.74
RPN3	YER021W	SEC7	P11075	2009 aa	Known RBP	4.17	□□□□□ -1.74
RPN3	YER021W	RPS13	P05756	151 aa	Known RBP	4.17	□□□□□ -1.74
RPN3	YER021W	CDC6	P09119	513 aa		4.17	□□□□□ -1.74
RPN3	YER021W	ENA1	P13587	1091 aa		4.17	□□□□□ -1.74
RPN3	YER021W	RPC82	P32349	654 aa		4.17	□□□□□ -1.74
RPN3	YER021W	REC104	P33323	182 aa		4.17	□□□□□ -1.74
RPN3	YER021W	ENA2	Q01896	1091 aa		4.17	□□□□□ -1.74
RPN3	YER021W	GCN5	Q03330	439 aa		4.17	□□□□□ -1.74
RPN3	YER021W	FPR4	Q06205	392 aa	Predicted RBP	4.17	□□□□□ -1.74
RPN3	YER021W	YPL277C	Q08989	487 aa		4.17	□□□□□ -1.74
RPN3	YER021W	ENA5	Q12691	1091 aa		4.17	□□□□□ -1.74
RPN3	YER021W	SOD2	P00447	233 aa		4.16	□□□□□ -1.74
RPN3	YER021W	TOM70	P07213	617 aa	Known RBP	4.16	□□□□□ -1.74
RPN3	YER021W	PRP6	P19735	899 aa	Predicted RBP	4.16	□□□□□ -1.74
RPN3	YER021W	DOM34	P33309	386 aa		4.16	□□□□□ -1.74
RPN3	YER021W	FLR1	P38124	548 aa		4.16	□□□□□ -1.74
RPN3	YER021W	NUP82	P40368	713 aa		4.16	□□□□□ -1.74
RPN3	YER021W	GCV2	P49095	1034 aa		4.16	□□□□□ -1.74

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