RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C HFM1P51979 1187 aa5.12□□□□□ -1.59
SHU2YDR078C SFB2P53953 876 aa5.12□□□□□ -1.59
SHU2YDR078C GIS1Q03833 894 aa5.12□□□□□ -1.59
SHU2YDR078C YDR514CQ04408 483 aa5.12□□□□□ -1.59
SHU2YDR078C COG8Q04632 607 aa5.12□□□□□ -1.59
SHU2YDR078C RSB1Q08417 382 aa5.12□□□□□ -1.59
SHU2YDR078C TOP1P04786 769 aa5.11□□□□□ -1.59
SHU2YDR078C SFL1P20134 766 aa5.11□□□□□ -1.59
SHU2YDR078C RPC82P32349 654 aa5.11□□□□□ -1.59
SHU2YDR078C GRX7P38068 203 aa5.11□□□□□ -1.59
SHU2YDR078C NOP2P40991 618 aaKnown RBP5.11□□□□□ -1.59
SHU2YDR078C REH1Q06709 432 aa5.11□□□□□ -1.59
SHU2YDR078C YOL057WQ08225 711 aa5.11□□□□□ -1.59
SHU2YDR078C SVS1Q12254 260 aa5.11□□□□□ -1.59
SHU2YDR078C HOG1P32485 435 aa5.1□□□□□ -1.59
SHU2YDR078C MCD4P36051 919 aa5.1□□□□□ -1.59
SHU2YDR078C YAP1801P38856 637 aa5.1□□□□□ -1.59
SHU2YDR078C PEX7P39108 375 aa5.1□□□□□ -1.59
SHU2YDR078C GPP1P41277 250 aaKnown RBP5.1□□□□□ -1.59
SHU2YDR078C YJR120WP47157 116 aa5.1□□□□□ -1.59
SHU2YDR078C SNP1Q00916 300 aaPredicted RBP5.1□□□□□ -1.59
SHU2YDR078C MTQ2Q03920 221 aaPredicted RBP5.1□□□□□ -1.59
SHU2YDR078C YPR196WQ06595 470 aa5.1□□□□□ -1.59
SHU2YDR078C OSW2Q12202 724 aa5.1□□□□□ -1.59
SHU2YDR078C PRP6P19735 899 aaPredicted RBP5.09□□□□□ -1.59
SHU2YDR078C ADP1P25371 1049 aa5.09□□□□□ -1.59
SHU2YDR078C PER1P25625 357 aa5.09□□□□□ -1.59
SHU2YDR078C PCM1P38628 557 aaKnown RBP5.09□□□□□ -1.59
SHU2YDR078C TPM2P40414 161 aa5.09□□□□□ -1.59
SHU2YDR078C ORC3P54790 616 aa5.09□□□□□ -1.59
SHU2YDR078C HFD1Q04458 532 aa5.09□□□□□ -1.59
SHU2YDR078C TRE1Q08919 783 aa5.09□□□□□ -1.59
SHU2YDR078C RFA1P22336 621 aaKnown RBP5.08□□□□□ -1.6
SHU2YDR078C AIM26P32858 118 aa5.08□□□□□ -1.6
SHU2YDR078C ECM21P38167 1117 aaKnown RBP5.08□□□□□ -1.6
SHU2YDR078C NUG1P40010 520 aaKnown RBP5.08□□□□□ -1.6
SHU2YDR078C HXT16P47185 567 aa5.08□□□□□ -1.6
SHU2YDR078C TAD1P53065 400 aa5.08□□□□□ -1.6
SHU2YDR078C PEX8P53248 589 aa5.08□□□□□ -1.6
SHU2YDR078C NOG2P53742 486 aaKnown RBP5.08□□□□□ -1.6
SHU2YDR078C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
SHU2YDR078C SSY1Q03770 852 aa5.08□□□□□ -1.6
SHU2YDR078C ATG33Q06485 197 aa5.08□□□□□ -1.6
SHU2YDR078C GUD1Q07729 489 aa5.08□□□□□ -1.6
SHU2YDR078C XYL2Q07993 356 aa5.08□□□□□ -1.6
SHU2YDR078C DAL7P21826 554 aa5.07□□□□□ -1.6
SHU2YDR078C EUG1P32474 517 aa5.07□□□□□ -1.6
SHU2YDR078C YBR071WP38243 211 aa5.07□□□□□ -1.6
SHU2YDR078C RFC5P38251 354 aa5.07□□□□□ -1.6
SHU2YDR078C CKB2P38930 258 aa5.07□□□□□ -1.6
SHU2YDR078C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
SHU2YDR078C YJR096WP47137 282 aa5.07□□□□□ -1.6
SHU2YDR078C LPX1Q12405 387 aaKnown RBP5.07□□□□□ -1.6
SHU2YDR078C SPS1P08458 490 aa5.06□□□□□ -1.6
SHU2YDR078C HMG1P12683 1054 aa5.06□□□□□ -1.6
SHU2YDR078C URA1P28272 314 aaPredicted RBP5.06□□□□□ -1.6
SHU2YDR078C PRP19P32523 503 aaKnown RBP5.06□□□□□ -1.6
SHU2YDR078C GTS1P40956 396 aa5.06□□□□□ -1.6
SHU2YDR078C COG6P53959 839 aa5.06□□□□□ -1.6
SHU2YDR078C LRS4Q04087 347 aaKnown RBP5.06□□□□□ -1.6
SHU2YDR078C GUP2Q08929 609 aa5.06□□□□□ -1.6
SHU2YDR078C GIN4Q12263 1142 aa5.06□□□□□ -1.6
SHU2YDR078C NOT3P06102 836 aaKnown RBP5.05□□□□□ -1.6
SHU2YDR078C AIM3P38266 947 aaKnown RBP5.05□□□□□ -1.6
SHU2YDR078C PTC7P38797 343 aa5.05□□□□□ -1.6
SHU2YDR078C RPN10P38886 268 aaKnown RBP5.05□□□□□ -1.6
SHU2YDR078C ALY2P47029 1046 aa5.05□□□□□ -1.6
SHU2YDR078C AIM14P53109 570 aa5.05□□□□□ -1.6
SHU2YDR078C NHX1Q04121 633 aa5.05□□□□□ -1.6
SHU2YDR078C SIZ1Q04195 904 aa5.05□□□□□ -1.6
SHU2YDR078C TRE2Q08693 809 aa5.05□□□□□ -1.6
SHU2YDR078C YTM1Q12024 460 aaPredicted RBP5.05□□□□□ -1.6
SHU2YDR078C RIB2Q12362 591 aaKnown RBP5.05□□□□□ -1.6
SHU2YDR078C KIN2P13186 1147 aaKnown RBP5.04□□□□□ -1.6
SHU2YDR078C YCL002CP25565 263 aa5.04□□□□□ -1.6
SHU2YDR078C APL1P27351 700 aa5.04□□□□□ -1.6
SHU2YDR078C STE13P33894 931 aa5.04□□□□□ -1.6
SHU2YDR078C ABZ1P37254 787 aaPredicted RBP5.04□□□□□ -1.6
SHU2YDR078C RLP7P40693 322 aaKnown RBP5.04□□□□□ -1.6
SHU2YDR078C RAI1P53063 387 aaKnown RBP5.04□□□□□ -1.6
SHU2YDR078C HDA1P53973 706 aa5.04□□□□□ -1.6
SHU2YDR078C YBR182C-AQ8TGU6 64 aa5.04□□□□□ -1.6
SHU2YDR078C DIF1O13577 133 aa5.03□□□□□ -1.6
SHU2YDR078C MIH1P23748 554 aa5.03□□□□□ -1.6
SHU2YDR078C SEC6P32844 805 aa5.03□□□□□ -1.6
SHU2YDR078C HSL7P38274 827 aa5.03□□□□□ -1.6
SHU2YDR078C OAF1P39720 1047 aaPredicted RBP5.03□□□□□ -1.6
SHU2YDR078C DOT6P40059 670 aaKnown RBP5.03□□□□□ -1.6
SHU2YDR078C GZF3P42944 551 aaKnown RBP5.03□□□□□ -1.6
SHU2YDR078C PEX14P53112 341 aa5.03□□□□□ -1.6
SHU2YDR078C YKR011CQ02209 353 aa5.03□□□□□ -1.6
SHU2YDR078C VPS30Q02948 557 aa5.03□□□□□ -1.6
SHU2YDR078C MSC2Q03455 724 aa5.03□□□□□ -1.6
SHU2YDR078C TMA7Q3E764 64 aaKnown RBP5.03□□□□□ -1.6
SHU2YDR078C RPS9AO13516 197 aaKnown RBP5.02□□□□□ -1.61
SHU2YDR078C CYS3P31373 394 aaKnown RBP5.02□□□□□ -1.61
SHU2YDR078C CCR4P31384 837 aaKnown RBP5.02□□□□□ -1.61
SHU2YDR078C SRP101P32916 621 aa5.02□□□□□ -1.61
SHU2YDR078C TYE7P33122 291 aaPredicted RBP5.02□□□□□ -1.61
SHU2YDR078C SET5P38890 526 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms