RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR034C-D	YDR034C-D	RET2	P43621	546 aa		3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	PTK2	P47116	818 aa	Known RBP	3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	SKY1	Q03656	742 aa		3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	GRC3	Q07845	632 aa		3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	MET7	Q08645	548 aa		3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	DCS2	Q12123	353 aa		3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	SAN1	P22470	610 aa		3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	DID4	P36108	232 aa		3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	YTA6	P40328	754 aa		3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	SGM1	P47166	707 aa		3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	CDC26	P14724	124 aa		3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	SPO16	P17122	198 aa		3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	MUD2	P36084	527 aa	Known RBP	3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	MUM2	P38236	366 aa		3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	RGA1	P39083	1007 aa		3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	TPA1	P40032	644 aa	Known RBP	3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	DUS3	Q06053	668 aa	Known RBP	3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	AIR2	Q12476	344 aa	Known RBP	3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	SSL2	Q00578	843 aa		3.39	□□□□□ -1.87
YDR034C-D	YDR034C-D	NCP1	P16603	691 aa	Known RBP	3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	GFD2	P25370	566 aa	Known RBP	3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	AAR2	P32357	355 aa	Predicted RBP	3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	SWI3	P32591	825 aa		3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	MDJ1	P35191	511 aa		3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	ARL1	P38116	183 aa	Known RBP	3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	DPH1	P40487	425 aa	Known RBP	3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	SPO74	P45819	413 aa		3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	MSB3	P48566	633 aa	Predicted RBP	3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	INH1	P01097	85 aa		3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	SEC18	P18759	758 aa	Known RBP	3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	UTP22	P53254	1237 aa	Predicted RBP	3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	APE4	P38821	490 aa		3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	RIC1	P40395	1056 aa		3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	SRC1	Q03707	834 aa		3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	RSC58	Q07979	502 aa		3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.38	□□□□□ -1.87	not detected
YDR034C-D	YDR034C-D	RVB2	Q12464	471 aa	Known RBP	3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	TY4B-P	A0A0B7P3V8	1104 aa		3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	PSY4	P38193	441 aa		3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	IRC6	P43615	237 aa		3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	TY4A-H	Q6Q5P6	413 aa		3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	YBR182C-A	Q8TGU6	64 aa		3.38	□□□□□ -1.87
YDR034C-D	YDR034C-D	MTF2	P10849	440 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	REC104	P33323	182 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	UGA2	P38067	497 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	RMD8	P43620	662 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	SGD1	Q06132	899 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	HSP82	P02829	709 aa	Known RBP	3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	AAC3	P18238	307 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	PER1	P25625	357 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	AHP1	P38013	176 aa	Known RBP	3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	GYP1	Q08484	637 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	DLD1	P32891	587 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	NOP16	P40007	231 aa	Known RBP	3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	VTC2	P43585	828 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	UBC9	P50623	157 aa	Predicted RBP	3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	ARP4	P80428	489 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	SPN1	Q06505	410 aa	Predicted RBP	3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	VHS3	Q08438	674 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	NAT1	P12945	854 aa	Known RBP	3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	YKL077W	P36081	392 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	PGM2	P37012	569 aa	Known RBP	3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	FET4	P40988	552 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	YJR098C	P47139	656 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	YGR153W	P48238	217 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	CPR6	P53691	371 aa	Known RBP	3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	OMS1	Q06668	471 aa		3.37	□□□□□ -1.87
YDR034C-D	YDR034C-D	CBF2	P32504	956 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	PAH1	P32567	862 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	YKU70	P32807	602 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	AXL2	P38928	823 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	EMP65	P40085	556 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	SLD3	P53135	668 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	MEC3	Q02574	474 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	TDA9	Q04545	1251 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	TSR2	Q06672	205 aa	Known RBP	3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	PTC5	Q12511	572 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	SNF1	P06782	633 aa	Known RBP	3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	SWI6	P09959	803 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	PFK1	P16861	987 aa	Known RBP	3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	SCT1	P32784	759 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	IRC5	P43610	853 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	ARE2	P53629	642 aa	Known RBP	3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	TIM10	P87108	93 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	GRX3	Q03835	250 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	NHX1	Q04121	633 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	STE13	P33894	931 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	MRPL16	P38064	232 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	YRO2	P38079	344 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	NCL1	P38205	684 aa	Known RBP	3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	EAF5	P39995	279 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	TEP1	P53916	434 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	SXM1	Q04175	944 aa	Known RBP	3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	TRM8	Q12009	286 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	DPH6	Q12429	685 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	ILS1	P09436	1072 aa	Known RBP	3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	LAM1	P38851	1228 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	TMA108	P40462	946 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	SCM3	Q12334	223 aa		3.36	□□□□□ -1.87
YDR034C-D	YDR034C-D	CDC19	P00549	500 aa	Known RBP	3.35	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms