RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W MKT1P40850 830 aaKnown RBP7.48□□□□□ -1.21
NUP84YDL116W THI6P41835 540 aa7.48□□□□□ -1.21
NUP84YDL116W DIP5P53388 608 aa7.48□□□□□ -1.21
NUP84YDL116W GTR1Q00582 310 aa7.48□□□□□ -1.21
NUP84YDL116W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
NUP84YDL116W RAT1Q02792 1006 aaKnown RBP7.48□□□□□ -1.21
NUP84YDL116W GAS5Q08193 484 aa7.48□□□□□ -1.21
NUP84YDL116W CDC11P32458 415 aa7.47□□□□□ -1.21
NUP84YDL116W GAA1P39012 614 aa7.47□□□□□ -1.21
NUP84YDL116W ZIP2P53061 704 aa7.47□□□□□ -1.21
NUP84YDL116W ERP6P53198 216 aa7.47□□□□□ -1.21
NUP84YDL116W RET3P53600 189 aa7.47□□□□□ -1.21
NUP84YDL116W ENO2P00925 437 aaKnown RBP7.47□□□□□ -1.21
NUP84YDL116W CLN3P13365 580 aa7.47□□□□□ -1.21
NUP84YDL116W PFK1P16861 987 aaKnown RBP7.47□□□□□ -1.21
NUP84YDL116W SRV2P17555 526 aaKnown RBP7.47□□□□□ -1.21
NUP84YDL116W DPH5P32469 300 aaPredicted RBP7.47□□□□□ -1.21
NUP84YDL116W RAD54P32863 898 aa7.47□□□□□ -1.21
NUP84YDL116W TGL4P36165 910 aa7.47□□□□□ -1.21
NUP84YDL116W YJL181WP46987 611 aa7.47□□□□□ -1.21
NUP84YDL116W FOL1P53848 824 aa7.47□□□□□ -1.21
NUP84YDL116W VPS72Q03388 795 aa7.47□□□□□ -1.21
NUP84YDL116W SYF1Q04048 859 aaPredicted RBP7.47□□□□□ -1.21
NUP84YDL116W CSM3Q04659 317 aa7.47□□□□□ -1.21
NUP84YDL116W YBL113CQ7M4S9 792 aa7.47□□□□□ -1.21
NUP84YDL116W RPS7AP26786 190 aaKnown RBP7.46□□□□□ -1.21
NUP84YDL116W SEC20P28791 383 aa7.46□□□□□ -1.21
NUP84YDL116W EFB1P32471 206 aaKnown RBP7.46□□□□□ -1.21
NUP84YDL116W HEK2P38199 381 aaKnown RBP RIP-Chip data7.46□□□□□ -1.21not detected
NUP84YDL116W TDA3P38758 523 aa7.46□□□□□ -1.21
NUP84YDL116W LAM1P38851 1228 aa7.46□□□□□ -1.21
NUP84YDL116W YTA12P40341 825 aa7.46□□□□□ -1.21
NUP84YDL116W LYS4P49367 693 aaPredicted RBP7.46□□□□□ -1.21
NUP84YDL116W CEF1Q03654 590 aaPredicted RBP7.46□□□□□ -1.21
NUP84YDL116W YML082WQ04533 649 aaKnown RBP7.46□□□□□ -1.21
NUP84YDL116W CBF1P17106 351 aa7.46□□□□□ -1.22
NUP84YDL116W ILV6P25605 309 aaKnown RBP7.46□□□□□ -1.22
NUP84YDL116W PUP2P32379 260 aa7.46□□□□□ -1.22
NUP84YDL116W TIF4631P39935 952 aaKnown RBP7.46□□□□□ -1.22
NUP84YDL116W SAP185P40856 1058 aa7.46□□□□□ -1.22
NUP84YDL116W TFG1P41895 735 aaPredicted RBP7.46□□□□□ -1.22
NUP84YDL116W BRE2P43132 505 aa7.46□□□□□ -1.22
NUP84YDL116W UTP6Q02354 440 aaKnown RBP7.46□□□□□ -1.22
NUP84YDL116W MRX10Q05648 414 aa7.46□□□□□ -1.22
NUP84YDL116W PLP2Q12017 286 aa7.46□□□□□ -1.22
NUP84YDL116W FAL1Q12099 399 aaKnown RBP7.46□□□□□ -1.22
NUP84YDL116W NCR1Q12200 1170 aa7.46□□□□□ -1.22
NUP84YDL116W REC107P21651 314 aa7.45□□□□□ -1.22
NUP84YDL116W SCJ1P25303 377 aa7.45□□□□□ -1.22
NUP84YDL116W PUF4P25339 888 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
NUP84YDL116W MVD1P32377 396 aaKnown RBP7.45□□□□□ -1.22
NUP84YDL116W UBC6P33296 250 aaPredicted RBP7.45□□□□□ -1.22
NUP84YDL116W EXO5P38289 585 aa7.45□□□□□ -1.22
NUP84YDL116W RRT2P38332 387 aa7.45□□□□□ -1.22
NUP84YDL116W ERP5P38819 212 aa7.45□□□□□ -1.22
NUP84YDL116W RPS0BP46654 252 aaKnown RBP7.45□□□□□ -1.22
NUP84YDL116W YNL144CP53907 740 aa7.45□□□□□ -1.22
NUP84YDL116W RRP15Q06511 250 aaPredicted RBP7.45□□□□□ -1.22
NUP84YDL116W FRA1Q07825 749 aa7.45□□□□□ -1.22
NUP84YDL116W SLX4Q12098 748 aa7.45□□□□□ -1.22
NUP84YDL116W RTP1Q12751 981 aa7.45□□□□□ -1.22
NUP84YDL116W YLR462WO13556 202 aa7.44□□□□□ -1.22
NUP84YDL116W YCR051WP25631 222 aa7.44□□□□□ -1.22
NUP84YDL116W CBF2P32504 956 aa7.44□□□□□ -1.22
NUP84YDL116W SSE1P32589 693 aaKnown RBP7.44□□□□□ -1.22
NUP84YDL116W STE13P33894 931 aa7.44□□□□□ -1.22
NUP84YDL116W NCL1P38205 684 aaKnown RBP7.44□□□□□ -1.22
NUP84YDL116W TIF5P38431 405 aaKnown RBP7.44□□□□□ -1.22
NUP84YDL116W YHL049CP38722 271 aa7.44□□□□□ -1.22
NUP84YDL116W ERC1P38767 581 aa7.44□□□□□ -1.22
NUP84YDL116W REV7P38927 245 aa7.44□□□□□ -1.22
NUP84YDL116W YEL075CP39972 122 aa7.44□□□□□ -1.22
NUP84YDL116W YER189WP40104 122 aa7.44□□□□□ -1.22
NUP84YDL116W TDA10P42938 290 aa7.44□□□□□ -1.22
NUP84YDL116W YFL064CP43540 174 aa7.44□□□□□ -1.22
NUP84YDL116W NIS1P53939 407 aa7.44□□□□□ -1.22
NUP84YDL116W TDA9Q04545 1251 aa7.44□□□□□ -1.22
NUP84YDL116W FAR8Q05040 523 aa7.44□□□□□ -1.22
NUP84YDL116W GNT1Q12096 491 aa7.44□□□□□ -1.22
NUP84YDL116W YBL111CQ3E7Y5 667 aa7.44□□□□□ -1.22
NUP84YDL116W SEY1Q99287 776 aa7.44□□□□□ -1.22
NUP84YDL116W FOB1O13329 566 aa7.44□□□□□ -1.22
NUP84YDL116W YDJ1P25491 409 aaKnown RBP7.44□□□□□ -1.22
NUP84YDL116W DAS1P47005 663 aa7.44□□□□□ -1.22
NUP84YDL116W RSM26P47141 266 aa7.44□□□□□ -1.22
NUP84YDL116W ILM1P47155 203 aa7.44□□□□□ -1.22
NUP84YDL116W PCL10P53124 433 aa7.44□□□□□ -1.22
NUP84YDL116W PUS6P53294 404 aa7.44□□□□□ -1.22
NUP84YDL116W HST2P53686 357 aa7.44□□□□□ -1.22
NUP84YDL116W JJJ1P53863 590 aa7.44□□□□□ -1.22
NUP84YDL116W YNL040WP53960 456 aaPredicted RBP7.44□□□□□ -1.22
NUP84YDL116W CUS1Q02554 436 aaPredicted RBP7.44□□□□□ -1.22
NUP84YDL116W YOR238WQ08634 303 aa7.44□□□□□ -1.22
NUP84YDL116W NCA2Q12374 616 aa7.44□□□□□ -1.22
NUP84YDL116W TY4A-HQ6Q5P6 413 aa7.44□□□□□ -1.22
NUP84YDL116W FIG2P25653 1609 aa7.44□□□□□ -1.22
NUP84YDL116W MST1P07236 462 aa7.43□□□□□ -1.22
NUP84YDL116W SUL1P38359 859 aa7.43□□□□□ -1.22
NUP84YDL116W HIS2P38635 335 aa7.43□□□□□ -1.22
NUP84YDL116W CCT3P39077 534 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms