RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 PHRF1Q9P1Y6 1649 aaKnown RBP20.21■□□□□ 0.83
PHGDH-223ENST00000641597 EVI5LQ96CN4 794 aa20.21■□□□□ 0.83
PHGDH-223ENST00000641597 SLC52A2Q9HAB3 445 aa20.21■□□□□ 0.83
PHGDH-223ENST00000641597 TPCN1Q9ULQ1 816 aa20.21■□□□□ 0.83
PHGDH-223ENST00000641597 C5P01031 1676 aa20.21■□□□□ 0.83
PHGDH-223ENST00000641597 DNM1Q05193 864 aaKnown RBP20.21■□□□□ 0.83
PHGDH-223ENST00000641597 CREB3L3Q68CJ9 461 aa20.21■□□□□ 0.83
PHGDH-223ENST00000641597 FSD1Q9BTV5 496 aa20.21■□□□□ 0.83
PHGDH-223ENST00000641597 GCKRQ14397 625 aa20.2■□□□□ 0.82
PHGDH-223ENST00000641597 MEGF6O75095 1541 aa20.2■□□□□ 0.82
PHGDH-223ENST00000641597 MSNP26038 577 aaKnown RBP20.2■□□□□ 0.82
PHGDH-223ENST00000641597 FERMT3Q86UX7 667 aa20.2■□□□□ 0.82
PHGDH-223ENST00000641597 RUFY2Q8WXA3 655 aa20.2■□□□□ 0.82
PHGDH-223ENST00000641597 GPATCH3Q96I76 525 aa20.2■□□□□ 0.82
PHGDH-223ENST00000641597 TSPY26PQ9H489 355 aa20.2■□□□□ 0.82
PHGDH-223ENST00000641597 ZSWIM6Q9HCJ5 1215 aa20.2■□□□□ 0.82
PHGDH-223ENST00000641597 SIPA1L3O60292 1781 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-223ENST00000641597 VPS37CA5D8V6 355 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-223ENST00000641597 DDX58O95786 925 aaKnown RBP20.19■□□□□ 0.82
PHGDH-223ENST00000641597 F13A1P00488 732 aa20.19■□□□□ 0.82
PHGDH-223ENST00000641597 CSB-PGBD3P0DP91 1061 aa20.19■□□□□ 0.82
PHGDH-223ENST00000641597 PHKG2P15735 406 aa20.19■□□□□ 0.82
PHGDH-223ENST00000641597 SLFNL1Q499Z3 407 aa20.19■□□□□ 0.82
PHGDH-223ENST00000641597 ERC1Q8IUD2 1116 aa20.19■□□□□ 0.82
PHGDH-223ENST00000641597 CYP46A1Q9Y6A2 500 aa20.19■□□□□ 0.82
PHGDH-223ENST00000641597 UBE3BQ7Z3V4 1068 aa20.19■□□□□ 0.82
PHGDH-223ENST00000641597 CYP27B1O15528 508 aa20.18■□□□□ 0.82
PHGDH-223ENST00000641597 EPB41L2O43491 1005 aaKnown RBP20.18■□□□□ 0.82
PHGDH-223ENST00000641597 UTYO14607 1347 aa20.18■□□□□ 0.82
PHGDH-223ENST00000641597 SLC27A2O14975 620 aa20.18■□□□□ 0.82
PHGDH-223ENST00000641597 MTMR6Q9Y217 621 aa20.18■□□□□ 0.82
PHGDH-223ENST00000641597 CHMP3Q9Y3E7 222 aa20.18■□□□□ 0.82
PHGDH-223ENST00000641597 TRPM3Q9HCF6 1732 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-223ENST00000641597 CCDC129Q6ZRS4 1044 aa20.17■□□□□ 0.82
PHGDH-223ENST00000641597 SEC62Q99442 399 aaKnown RBP20.17■□□□□ 0.82
PHGDH-223ENST00000641597 CHMP4AQ9BY43 222 aa20.17■□□□□ 0.82
PHGDH-223ENST00000641597 C1orf167Q5SNV9 1468 aa20.17■□□□□ 0.82
PHGDH-223ENST00000641597 STK3Q13188 491 aa20.17■□□□□ 0.82
PHGDH-223ENST00000641597 VPS53Q5VIR6 699 aa20.17■□□□□ 0.82
PHGDH-223ENST00000641597 MAP4K1Q92918 833 aa20.17■□□□□ 0.82
PHGDH-223ENST00000641597 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-223ENST00000641597 TFCP2Q12800 502 aa20.16■□□□□ 0.82
PHGDH-223ENST00000641597 LARP1Q6PKG0 1096 aaKnown RBP20.16■□□□□ 0.82
PHGDH-223ENST00000641597 LRP10Q7Z4F1 713 aa20.16■□□□□ 0.82
PHGDH-223ENST00000641597 DBNLQ9UJU6 430 aaKnown RBP20.16■□□□□ 0.82
PHGDH-223ENST00000641597 COL15A1P39059 1388 aa20.16■□□□□ 0.82
PHGDH-223ENST00000641597 HCLS1P14317 486 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-223ENST00000641597 ANKRD13DQ6ZTN6 518 aa20.16■□□□□ 0.82
PHGDH-223ENST00000641597 NEXNQ0ZGT2 675 aa20.15■□□□□ 0.82
PHGDH-223ENST00000641597 ZNF830Q96NB3 372 aaPredicted RBP20.15■□□□□ 0.82
PHGDH-223ENST00000641597 NOL7Q9UMY1 257 aaKnown RBP20.15■□□□□ 0.82
PHGDH-223ENST00000641597 GIMAP6Q6P9H5 292 aa20.15■□□□□ 0.82
PHGDH-223ENST00000641597 METTL22Q9BUU2 404 aaPredicted RBP20.15■□□□□ 0.82
PHGDH-223ENST00000641597 ZKSCAN1P17029 563 aaPredicted RBP20.14■□□□□ 0.82
PHGDH-223ENST00000641597 TATP17735 454 aaPredicted RBP20.14■□□□□ 0.82
PHGDH-223ENST00000641597 USP25Q9UHP3 1055 aa20.14■□□□□ 0.82
PHGDH-223ENST00000641597 CDC37L1Q7L3B6 337 aa20.14■□□□□ 0.81
PHGDH-223ENST00000641597 KCNB2Q92953 911 aa20.13■□□□□ 0.81
PHGDH-223ENST00000641597 DNAJC2Q99543 621 aaKnown RBP20.13■□□□□ 0.81
PHGDH-223ENST00000641597 OVOS2A0A0G2JMS6 1433 aa20.13■□□□□ 0.81
PHGDH-223ENST00000641597 ZNF142P52746 1687 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-223ENST00000641597 PTPN12Q05209 780 aaKnown RBP20.13■□□□□ 0.81
PHGDH-223ENST00000641597 DBNDD2Q9BQY9 259 aa20.13■□□□□ 0.81
PHGDH-223ENST00000641597 C19orf44Q9H6X5 657 aa20.13■□□□□ 0.81
PHGDH-223ENST00000641597 RFX5P48382 616 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-223ENST00000641597 TMEM87AQ8NBN3 555 aa20.12■□□□□ 0.81
PHGDH-223ENST00000641597 SYAP1Q96A49 352 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-223ENST00000641597 CAMTA1Q9Y6Y1 1673 aa20.12■□□□□ 0.81
PHGDH-223ENST00000641597 DDX46Q7L014 1031 aaKnown RBP20.11■□□□□ 0.81
PHGDH-223ENST00000641597 TTC5Q8N0Z6 440 aa20.11■□□□□ 0.81
PHGDH-223ENST00000641597 LRRC2Q9BYS8 371 aa20.11■□□□□ 0.81
PHGDH-223ENST00000641597 A0A087WZG4 1122 aa20.11■□□□□ 0.81
PHGDH-223ENST00000641597 PPFIA3O75145 1194 aa20.11■□□□□ 0.81
PHGDH-223ENST00000641597 TOB2Q14106 344 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-223ENST00000641597 TM6SF1Q9BZW5 370 aa20.11■□□□□ 0.81
PHGDH-223ENST00000641597 ZKSCAN5Q9Y2L8 839 aa20.11■□□□□ 0.81
PHGDH-223ENST00000641597 OFD1O75665 1012 aa20.1■□□□□ 0.81
PHGDH-223ENST00000641597 IFNL2Q8IZJ0 200 aa20.1■□□□□ 0.81
PHGDH-223ENST00000641597 R3HCC1Q9Y3T6 440 aaKnown RBP20.1■□□□□ 0.81
PHGDH-223ENST00000641597 SCN11AQ9UI33 1791 aa20.1■□□□□ 0.81
PHGDH-223ENST00000641597 UBE2HP62256 183 aa20.1■□□□□ 0.81
PHGDH-223ENST00000641597 TNNI3KQ59H18 835 aa20.1■□□□□ 0.81
PHGDH-223ENST00000641597 CCDC183Q5T5S1 534 aa20.1■□□□□ 0.81
PHGDH-223ENST00000641597 LARP1BQ659C4 914 aaKnown RBP20.1■□□□□ 0.81
PHGDH-223ENST00000641597 FPGT-TNNI3KV9GXZ4 949 aa20.1■□□□□ 0.81
PHGDH-223ENST00000641597 MED23Q9ULK4 1368 aa20.1■□□□□ 0.81
PHGDH-223ENST00000641597 TAF5LO75529 589 aa20.09■□□□□ 0.81
PHGDH-223ENST00000641597 SNRPA1P09661 255 aaKnown RBP20.09■□□□□ 0.81
PHGDH-223ENST00000641597 ADAMTS7Q9UKP4 1686 aa20.09■□□□□ 0.81
PHGDH-223ENST00000641597 A0A0G2JLW4 131 aa20.09■□□□□ 0.81
PHGDH-223ENST00000641597 PTMAP06454 111 aaKnown RBP20.09■□□□□ 0.81
PHGDH-223ENST00000641597 PLCB2Q00722 1185 aa20.09■□□□□ 0.81
PHGDH-223ENST00000641597 BLOC1S2Q6QNY1 142 aa20.09■□□□□ 0.81
PHGDH-223ENST00000641597 TFIP11Q9UBB9 837 aaKnown RBP20.09■□□□□ 0.81
PHGDH-223ENST00000641597 JAK2O60674 1132 aa20.08■□□□□ 0.81
PHGDH-223ENST00000641597 TTC6Q86TZ1 520 aa20.08■□□□□ 0.81
PHGDH-223ENST00000641597 C17orf53Q8N3J3 647 aaPredicted RBP20.08■□□□□ 0.81
PHGDH-223ENST00000641597 NBPF26B4DH59 902 aa20.08■□□□□ 0.8
PHGDH-223ENST00000641597 NBPF14Q5TI25 921 aa20.08■□□□□ 0.8
PHGDH-223ENST00000641597 NBPF10Q6P3W6 841 aaKnown RBP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms