RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	WBP1L	Q9NX94	342 aa		13.28	□□□□□ -0.28
PHGDH-222	ENST00000641587	GJA3	Q9Y6H8	435 aa		13.28	□□□□□ -0.28
PHGDH-222	ENST00000641587	RASSF10	A6NK89	507 aa		13.27	□□□□□ -0.29
PHGDH-222	ENST00000641587	TCERG1	O14776	1098 aa	Known RBP	13.27	□□□□□ -0.29
PHGDH-222	ENST00000641587	RGL2	O15211	777 aa		13.27	□□□□□ -0.29
PHGDH-222	ENST00000641587	HSPA8	P11142	646 aa	Known RBP	13.27	□□□□□ -0.29
PHGDH-222	ENST00000641587	C3orf67	Q6ZVT6	689 aa		13.27	□□□□□ -0.29
PHGDH-222	ENST00000641587	GPC2	Q8N158	579 aa		13.27	□□□□□ -0.29
PHGDH-222	ENST00000641587	PSMD1	Q99460	953 aa		13.27	□□□□□ -0.29
PHGDH-222	ENST00000641587	THUMPD2	Q9BTF0	503 aa	Known RBP	13.27	□□□□□ -0.29
PHGDH-222	ENST00000641587	ZBTB3	Q9H5J0	574 aa		13.27	□□□□□ -0.29
PHGDH-222	ENST00000641587	RRP7A	Q9Y3A4	280 aa	Known RBP	13.27	□□□□□ -0.29
PHGDH-222	ENST00000641587	MAP3K15	Q6ZN16	1313 aa		13.27	□□□□□ -0.29
PHGDH-222	ENST00000641587	MYL6B	P14649	208 aa		13.26	□□□□□ -0.29
PHGDH-222	ENST00000641587	EPS15	P42566	896 aa		13.26	□□□□□ -0.29
PHGDH-222	ENST00000641587	SCNN1D	P51172	638 aa		13.26	□□□□□ -0.29
PHGDH-222	ENST00000641587	DEFB115	Q30KQ5	88 aa		13.26	□□□□□ -0.29
PHGDH-222	ENST00000641587	RIC1	Q4ADV7	1423 aa		13.26	□□□□□ -0.29
PHGDH-222	ENST00000641587	PNMA8A	Q86V59	439 aa	Predicted RBP	13.26	□□□□□ -0.29
PHGDH-222	ENST00000641587	JDP2	Q8WYK2	163 aa		13.26	□□□□□ -0.29
PHGDH-222	ENST00000641587	WDR33	Q9C0J8	1336 aa	Known RBP	13.26	□□□□□ -0.29
PHGDH-222	ENST00000641587	ABT1	Q9ULW3	272 aa	Known RBP	13.26	□□□□□ -0.29
PHGDH-222	ENST00000641587	THSD7B	Q9C0I4	1608 aa		13.25	□□□□□ -0.29
PHGDH-222	ENST00000641587	ANP32C	O43423	234 aa		13.25	□□□□□ -0.29
PHGDH-222	ENST00000641587	HTATSF1	O43719	755 aa	Known RBP	13.25	□□□□□ -0.29
PHGDH-222	ENST00000641587	EIF6	P56537	245 aa	Known RBP	13.25	□□□□□ -0.29
PHGDH-222	ENST00000641587	SUSD4	Q5VX71	490 aa		13.25	□□□□□ -0.29
PHGDH-222	ENST00000641587	RPGR	Q92834	1020 aa	Known RBP	13.25	□□□□□ -0.29
PHGDH-222	ENST00000641587	NYX	Q9GZU5	481 aa		13.25	□□□□□ -0.29
PHGDH-222	ENST00000641587	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
PHGDH-222	ENST00000641587	ERVV-1	B6SEH8	477 aa		13.24	□□□□□ -0.29
PHGDH-222	ENST00000641587	TRAF5	O00463	557 aa		13.24	□□□□□ -0.29
PHGDH-222	ENST00000641587	PPEF1	O14829	653 aa	Predicted RBP	13.24	□□□□□ -0.29
PHGDH-222	ENST00000641587	EIF4A1	P60842	406 aa	Known RBP	13.24	□□□□□ -0.29
PHGDH-222	ENST00000641587	GRM1	Q13255	1194 aa		13.24	□□□□□ -0.29
PHGDH-222	ENST00000641587	LARGE2	Q8N3Y3	721 aa		13.24	□□□□□ -0.29
PHGDH-222	ENST00000641587	TRPM7	Q96QT4	1865 aa		13.24	□□□□□ -0.29
PHGDH-222	ENST00000641587	NTSR2	O95665	410 aa		13.23	□□□□□ -0.29
PHGDH-222	ENST00000641587	LMOD1	P29536	600 aa	Predicted RBP	13.23	□□□□□ -0.29
PHGDH-222	ENST00000641587	HOXA10	P31260	410 aa	Predicted RBP	13.23	□□□□□ -0.29
PHGDH-222	ENST00000641587	KIF6	Q6ZMV9	814 aa		13.23	□□□□□ -0.29
PHGDH-222	ENST00000641587	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.23	□□□□□ -0.29
PHGDH-222	ENST00000641587	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.22	□□□□□ -0.29
PHGDH-222	ENST00000641587	AOC3	Q16853	763 aa		13.22	□□□□□ -0.29
PHGDH-222	ENST00000641587	CC2D2B	Q6DHV5	1058 aa		13.22	□□□□□ -0.29
PHGDH-222	ENST00000641587	CYP4F22	Q6NT55	531 aa		13.22	□□□□□ -0.29
PHGDH-222	ENST00000641587	ZNF34	Q8IZ26	560 aa		13.22	□□□□□ -0.29
PHGDH-222	ENST00000641587	LAMB2	P55268	1798 aa		13.22	□□□□□ -0.29
PHGDH-222	ENST00000641587	PPIP5K2	O43314	1243 aa		13.21	□□□□□ -0.29
PHGDH-222	ENST00000641587	ANXA1	P04083	346 aa		13.21	□□□□□ -0.29
PHGDH-222	ENST00000641587	CST9	Q5W186	159 aa		13.21	□□□□□ -0.29
PHGDH-222	ENST00000641587	NIM1K	Q8IY84	436 aa		13.21	□□□□□ -0.29
PHGDH-222	ENST00000641587	ABHD8	Q96I13	439 aa		13.21	□□□□□ -0.29
PHGDH-222	ENST00000641587	RBM17	Q96I25	401 aa	Known RBP	13.21	□□□□□ -0.29
PHGDH-222	ENST00000641587	CAPNS2	Q96L46	248 aa		13.21	□□□□□ -0.29
PHGDH-222	ENST00000641587	PLEKHF1	Q96S99	279 aa		13.21	□□□□□ -0.29
PHGDH-222	ENST00000641587	TSKS	Q9UJT2	592 aa		13.21	□□□□□ -0.29
PHGDH-222	ENST00000641587	MAP2K1	Q02750	393 aa	Predicted RBP	13.2	□□□□□ -0.3
PHGDH-222	ENST00000641587	PROSER3	Q2NL68	480 aa		13.2	□□□□□ -0.3
PHGDH-222	ENST00000641587	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.2	□□□□□ -0.3
PHGDH-222	ENST00000641587	PNISR	Q8TF01	805 aa	Known RBP	13.2	□□□□□ -0.3
PHGDH-222	ENST00000641587	CRAMP1	Q96RY5	1269 aa		13.2	□□□□□ -0.3
PHGDH-222	ENST00000641587	TAF1	P21675	1872 aa		13.2	□□□□□ -0.3
PHGDH-222	ENST00000641587	ABCC4	O15439	1325 aa		13.19	□□□□□ -0.3
PHGDH-222	ENST00000641587	AOC2	O75106	756 aa		13.19	□□□□□ -0.3
PHGDH-222	ENST00000641587	NFE2L2	Q16236	605 aa		13.19	□□□□□ -0.3
PHGDH-222	ENST00000641587	FAM161A	Q3B820	660 aa		13.19	□□□□□ -0.3
PHGDH-222	ENST00000641587	USP50	Q70EL3	339 aa	Predicted RBP	13.19	□□□□□ -0.3
PHGDH-222	ENST00000641587	LRP10	Q7Z4F1	713 aa		13.19	□□□□□ -0.3
PHGDH-222	ENST00000641587	ZNF428	Q96B54	188 aa		13.19	□□□□□ -0.3
PHGDH-222	ENST00000641587	ANKRD36C	Q5JPF3	1778 aa		13.19	□□□□□ -0.3
PHGDH-222	ENST00000641587	EIF2S2	P20042	333 aa	Known RBP	13.18	□□□□□ -0.3
PHGDH-222	ENST00000641587	CXCL9	Q07325	125 aa		13.18	□□□□□ -0.3
PHGDH-222	ENST00000641587	PDIA6	Q15084	440 aa		13.18	□□□□□ -0.3
PHGDH-222	ENST00000641587	MIER1	Q8N108	512 aa		13.18	□□□□□ -0.3
PHGDH-222	ENST00000641587	GPR101	Q96P66	508 aa	Predicted RBP	13.18	□□□□□ -0.3
PHGDH-222	ENST00000641587	GPRC5D	Q9NZD1	345 aa		13.18	□□□□□ -0.3
PHGDH-222	ENST00000641587	TLL2	Q9Y6L7	1015 aa		13.18	□□□□□ -0.3
PHGDH-222	ENST00000641587	SHTN1	A0MZ66	631 aa		13.17	□□□□□ -0.3
PHGDH-222	ENST00000641587	NEFM	P07197	916 aa		13.17	□□□□□ -0.3
PHGDH-222	ENST00000641587	GMPS	P49915	693 aa	Predicted RBP	13.17	□□□□□ -0.3
PHGDH-222	ENST00000641587	PPP1R42	Q7Z4L9	355 aa		13.17	□□□□□ -0.3
PHGDH-222	ENST00000641587	NLRP3	Q96P20	1036 aa		13.17	□□□□□ -0.3
PHGDH-222	ENST00000641587	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.17	□□□□□ -0.3
PHGDH-222	ENST00000641587	TSPYL4	Q9UJ04	414 aa		13.17	□□□□□ -0.3
PHGDH-222	ENST00000641587	ATP6V0A2	Q9Y487	856 aa		13.17	□□□□□ -0.3
PHGDH-222	ENST00000641587	DUOX1	Q9NRD9	1551 aa		13.16	□□□□□ -0.3
PHGDH-222	ENST00000641587	HCLS1	P14317	486 aa	Predicted RBP	13.16	□□□□□ -0.3
PHGDH-222	ENST00000641587	ECE1	P42892	770 aa		13.16	□□□□□ -0.3
PHGDH-222	ENST00000641587	GRIPAP1	Q4V328	841 aa		13.16	□□□□□ -0.3
PHGDH-222	ENST00000641587	PARP10	Q53GL7	1025 aa		13.16	□□□□□ -0.3
PHGDH-222	ENST00000641587	TRPM4	Q8TD43	1214 aa		13.16	□□□□□ -0.3
PHGDH-222	ENST00000641587	NECTIN2	Q92692	538 aa		13.16	□□□□□ -0.3
PHGDH-222	ENST00000641587	UTP14A	Q9BVJ6	771 aa	Known RBP	13.16	□□□□□ -0.3
PHGDH-222	ENST00000641587	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.16	□□□□□ -0.3
PHGDH-222	ENST00000641587	ADARB2	Q9NS39	739 aa	Known RBP	13.16	□□□□□ -0.3
PHGDH-222	ENST00000641587	ERBB4	Q15303	1308 aa		13.15	□□□□□ -0.3
PHGDH-222	ENST00000641587	CASP8AP2	Q9UKL3	1982 aa		13.15	□□□□□ -0.3
PHGDH-222	ENST00000641587	RAD17	O75943	681 aa		13.15	□□□□□ -0.3
PHGDH-222	ENST00000641587	CELF2	O95319	508 aa	Known RBP	13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms